30149.m000231 (Ricinus communis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 30149.m000231 T047916_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN

NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.870 0.804
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH

DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.848 0.725
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA

TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.848 0.725
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30149.m000231 bHLH 306 356

Links

Other bHLH family TFs
Other Ricinus communis TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava35513.valid.m1 Manihot esculenta cassava35513.valid.m1 I 0.914
Carubv10023683m.g Capsella rubella Carubv10023683m.g I 0.911
Pm007619 Prunus mume Pm007619 I 0.911
Cagra.3706s0004 Capsella grandiflora Cagra.3706s0004 I 0.911
SapurV1A.0529s0060 Salix purpurea SapurV1A.0529s0060 I 0.911
Bra004748 Brassica rapa Bra004748 I 0.911
fgenesh2_kg.4__2475__AT2G43140.1 Arabidopsis lyrata fgenesh2_kg.4__2475__AT2G43140.1 I 0.911
VIT_05s0124g00240 Vitis vinifera VIT_05s0124g00240 I 0.911
GLYMA20G39220 Glycine max GLYMA20G39220 I 0.911
PRUPE_ppa025178mg Prunus persica PRUPE_ppa025178mg I 0.911
MDP0000273574 Malus domestica MDP0000273574 I 0.911
Gorai.011G144600 Gossypium raimondii Gorai.011G144600 I 0.911
Bra000291 Brassica rapa Bra000291 I 0.911
Solyc09g098110.2 Solanum lycopersicum Solyc09g098110.2 I 0.911
Bostr.25993s0461 Boechera stricta Bostr.25993s0461 I 0.911
AT2G43140 Arabidopsis thaliana AT2G43140 I 0.911
Bo4g019620 Brassica oleracea Bo4g019620 I 0.911
mgf005043m Mimulus guttatus mgf005043m I 0.911
Bo3g036400 Brassica oleracea Bo3g036400 I 0.911
chr5.LjT42F22.20.nc Lotus japonicus chr5.LjT42F22.20.nc I 0.911
TCM_020066 Theobroma cacao TCM_020066 I 0.911
Thhalv10016998m.g Eutrema salsugineum Thhalv10016998m.g I 0.911
PGSC0003DMG400006569 Solanum tuberosum PGSC0003DMG400006569 I 0.911
PK07850.1 Cannabis sativa PK07850.1 I 0.911
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.891
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.891
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.891
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.891
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.891
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.891
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.891
Aquca_058_00134 Aquilegia coerulea Aquca_058_00134 I 0.891
OBART02G23210 Oryza barthii OBART02G23210 I 0.891
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.891
OB02G30670 Oryza brachyantha OB02G30670 I 0.891
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.891
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.891
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.891
Si010513m.g Setaria italica Si010513m.g I 0.891
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.891
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.891
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.891
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.891
SapurV1A.0402s0180 Salix purpurea SapurV1A.0402s0180 I 0.890
SapurV1A.0071s0010 Salix purpurea SapurV1A.0071s0010 I 0.890
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.882
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.880
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.880
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I 0.879
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I 0.879
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.878
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.878
Bra037732 Brassica rapa Bra037732 N 0.873
Bo4g194080 Brassica oleracea Bo4g194080 N 0.873
cassava2126.valid.m1 Manihot esculenta cassava2126.valid.m1 I 0.870
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I 0.870
cassava30692.valid.m1 Manihot esculenta cassava30692.valid.m1 I 0.870
Solyc10g079050.1 Solanum lycopersicum Solyc10g079050.1 I 0.870
TCM_024842 Theobroma cacao TCM_024842 I 0.870
VIT_08s0007g07810 Vitis vinifera VIT_08s0007g07810 I 0.870
Pm000447 Prunus mume Pm000447 I 0.870
Pm025821 Prunus mume Pm025821 I 0.870
Cla017792 Citrullus lanatus Cla017792 I 0.870
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I 0.870
29216.m000261 Ricinus communis 29216.m000261 I 0.870
Gorai.002G228900 Gossypium raimondii Gorai.002G228900 I 0.870
MDP0000180376 Malus domestica MDP0000180376 I 0.870
Lus10031826.g Linum usitatissimum Lus10031826.g I 0.870
Lus10031255.g Linum usitatissimum Lus10031255.g I 0.870
Lus10021023.g Linum usitatissimum Lus10021023.g I 0.870
orange1.1g018007m.g Citrus sinensis orange1.1g018007m.g I 0.870
SapurV1A.0018s0320 Salix purpurea SapurV1A.0018s0320 I 0.870
PDK_20s1391471g001 Phoenix dactylifera PDK_20s1391471g001 I 0.870
PK18038.1 Cannabis sativa PK18038.1 I 0.870
SapurV1A.0133s0050 Salix purpurea SapurV1A.0133s0050 I 0.870
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I 0.870
gene20622-v1.0-hybrid Fragaria vesca gene20622-v1.0-hybrid I 0.870
mgf016734m Mimulus guttatus mgf016734m I 0.870
Cucsa.242910 Cucumis sativus Cucsa.242910 I 0.870
cassava44054.valid.m1 Manihot esculenta cassava44054.valid.m1 I 0.870
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I 0.870
Ciclev10005233m.g Citrus clementina Ciclev10005233m.g I 0.870
gene00545-v1.0-hybrid Fragaria vesca gene00545-v1.0-hybrid I 0.870
evm.TU.supercontig_84.89 Carica papaya evm.TU.supercontig_84.89 I 0.870
Eucgr.A02417 Eucalyptus grandis Eucgr.A02417 I 0.870
cassava35967.valid.m1 Manihot esculenta cassava35967.valid.m1 I 0.870
TRIUR3_26625 Triticum urartu TRIUR3_26625 I 0.870
ONIVA08G22410 Oryza nivara ONIVA08G22410 I 0.870
OPUNC08G18020 Oryza punctata OPUNC08G18020 I 0.870
ONIVA08G17500 Oryza nivara ONIVA08G17500 I 0.870
OMERI08G16700 Oryza meridionalis OMERI08G16700 I 0.870
OLONG_017566 Oryza longistaminata OLONG_017566 I 0.870
OPUNC09G13060 Oryza punctata OPUNC09G13060 I 0.870
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I 0.870
OS08G0506700 Oryza sativa OS08G0506700 D 0.870
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I 0.870
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I 0.870
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I 0.870
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I 0.870
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I 0.870
GLYMA10G12150 Glycine max GLYMA10G12150 I 0.870
BGIOSGA031008 Oryza indica BGIOSGA031008 I 0.870
F775_24151 Aegilops tauschii F775_24151 I 0.870
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I 0.870
BGIOSGA028963 Oryza indica BGIOSGA028963 I 0.870
GSMUA_Achr5G22310_001 Musa acuminata GSMUA_Achr5G22310_001 I 0.870
OBART09G14660 Oryza barthii OBART09G14660 I 0.870
OBART08G19860 Oryza barthii OBART08G19860 I 0.870
OB08G26810 Oryza brachyantha OB08G26810 I 0.870
MLOC_67834 Hordeum vulgare MLOC_67834 I 0.870
OS09G0487900 Oryza sativa OS09G0487900 I 0.870
OMERI09G11370 Oryza meridionalis OMERI09G11370 I 0.870
POPTR_0016s05100 Populus trichocarpa POPTR_0016s05100 I 0.870
PRUPE_ppa019977mg Prunus persica PRUPE_ppa019977mg I 0.870
PRUPE_ppa006295mg Prunus persica PRUPE_ppa006295mg I 0.870
PGSC0003DMG400008153 Solanum tuberosum PGSC0003DMG400008153 I 0.870
POPTR_0006s05640 Populus trichocarpa POPTR_0006s05640 I 0.870
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I 0.867
30152.m002405 Ricinus communis 30152.m002405 I 0.867
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I 0.867
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I 0.867
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I 0.867
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I 0.867
Si017194m.g Setaria italica Si017194m.g I 0.861
GSMUA_Achr7G20490_001 Musa acuminata GSMUA_Achr7G20490_001 I 0.858
Lus10026733.g Linum usitatissimum Lus10026733.g I 0.856
Lus10025518.g Linum usitatissimum Lus10025518.g I 0.856
Eucgr.A00213 Eucalyptus grandis Eucgr.A00213 I 0.856
Bo5g006980 Brassica oleracea Bo5g006980 I 0.856
Bo5g007030 Brassica oleracea Bo5g007030 I 0.856
Bra015456 Brassica rapa Bra015456 I 0.856
Ca_14007 Cicer arietinum Ca_14007 I 0.853
Cucsa.094340 Cucumis sativus Cucsa.094340 I 0.853
fgenesh2_kg.1__542__AT1G05805.1 Arabidopsis lyrata fgenesh2_kg.1__542__AT1G05805.1 I 0.853
MTR_1g116790 Medicago truncatula MTR_1g116790 I 0.853
Bostr.25219s0385 Boechera stricta Bostr.25219s0385 I 0.853
Thhalv10008050m.g Eutrema salsugineum Thhalv10008050m.g I 0.853
Cagra.1671s0210 Capsella grandiflora Cagra.1671s0210 I 0.853
BHLH128 Arabidopsis thaliana AT1G05805 I 0.853
Carubv10009382m.g Capsella rubella Carubv10009382m.g I 0.853
GLYMA08G16190 Glycine max GLYMA08G16190 I 0.850
MTR_3g027650 Medicago truncatula MTR_3g027650 I 0.850
GLYMA13G27455 Glycine max GLYMA13G27455 I 0.850
Cucsa.050160 Cucumis sativus Cucsa.050160 I 0.850
MTR_3g028520 Medicago truncatula MTR_3g028520 I 0.850
Cla015469 Citrullus lanatus Cla015469 I 0.850
GLYMA12G36750 Glycine max GLYMA12G36750 I 0.850
TCM_036484 Theobroma cacao TCM_036484 I 0.848
orange1.1g023215m.g Citrus sinensis orange1.1g023215m.g I 0.848
Bra036760 Brassica rapa Bra036760 I 0.848
Bo8g026850 Brassica oleracea Bo8g026850 I 0.848
Bo6g043840 Brassica oleracea Bo6g043840 I 0.848
Thhalv10028883m.g Eutrema salsugineum Thhalv10028883m.g I 0.848
PK06301.1 Cannabis sativa PK06301.1 I 0.848
SapurV1A.1647s0020 Salix purpurea SapurV1A.1647s0020 I 0.848
SapurV1A.0690s0120 Salix purpurea SapurV1A.0690s0120 I 0.848
fgenesh2_kg.6__2924__AT4G09180.1 Arabidopsis lyrata fgenesh2_kg.6__2924__AT4G09180.1 I 0.848
SapurV1A.0391s0050 Salix purpurea SapurV1A.0391s0050 I 0.848
Bra028088 Brassica rapa Bra028088 I 0.848
GLYMA08G26110 Glycine max GLYMA08G26110 I 0.848
PRUPE_ppa011017mg Prunus persica PRUPE_ppa011017mg I 0.848
Bostr.25463s0393 Boechera stricta Bostr.25463s0393 I 0.848
Pm004181 Prunus mume Pm004181 I 0.848
Cagra.18223s0002 Capsella grandiflora Cagra.18223s0002 I 0.848
Cagra.9781s0002 Capsella grandiflora Cagra.9781s0002 I 0.848
Bostr.1774s0027 Boechera stricta Bostr.1774s0027 I 0.848
BHLH80 Arabidopsis thaliana AT1G35460 D 0.848
Cucsa.061590 Cucumis sativus Cucsa.061590 I 0.848
cassava13743.valid.m1 Manihot esculenta cassava13743.valid.m1 I 0.848
mgf002701m Mimulus guttatus mgf002701m I 0.848
PGSC0003DMG400031314 Solanum tuberosum PGSC0003DMG400031314 I 0.848
Carubv10001721m.g Capsella rubella Carubv10001721m.g I 0.848
Carubv10010050m.g Capsella rubella Carubv10010050m.g I 0.848
gene26880-v1.0-hybrid Fragaria vesca gene26880-v1.0-hybrid I 0.848
BHLH81 Arabidopsis thaliana AT4G09180 I 0.848
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I 0.848
MDP0000269890 Malus domestica MDP0000269890 I 0.848
scaffold_103992.1 Arabidopsis lyrata scaffold_103992.1 I 0.848
VIT_18s0041g00690 Vitis vinifera VIT_18s0041g00690 I 0.848
Solyc06g065040.2 Solanum lycopersicum Solyc06g065040.2 I 0.848
Ciclev10002083m.g Citrus clementina Ciclev10002083m.g I 0.848
TCM_005925 Theobroma cacao TCM_005925 I 0.846
Gorai.004G035800 Gossypium raimondii Gorai.004G035800 I 0.846
chr1.CM0318.250.nd Lotus japonicus chr1.CM0318.250.nd I 0.844
Ciclev10031622m.g Citrus clementina Ciclev10031622m.g I 0.841
gene26967-v1.0-hybrid Fragaria vesca gene26967-v1.0-hybrid I 0.841
orange1.1g016638m.g Citrus sinensis orange1.1g016638m.g I 0.841
GLYMA02G29830 Glycine max GLYMA02G29830 I 0.839
POPTR_0001s27680 Populus trichocarpa POPTR_0001s27680 I 0.838
chr3.LjT46L11.40.nc Lotus japonicus chr3.LjT46L11.40.nc N 0.838