30152.m002405 (Ricinus communis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 30152.m002405 T047917_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN

NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.900 0.918
BHLH122
M06724_2.00
Arabidopsis thaliana
NNDNCMACTTGNNH

DNNCAAGTKGNHNN
Dap-seq
OMalley et al.(2016)
bHLH122_col100_a
0.877 0.918
BHLH122
M06725_2.00
Arabidopsis thaliana
DNCMACTTGYN

NRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH122_colamp_a
0.877 0.918
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH

DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.858 0.816
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA

TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.858 0.816
AT2G42280
M06733_2.00
Arabidopsis thaliana
DNCMACTTGYH

DRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH130_col_a
0.854 0.918
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30152.m002405 bHLH 359 407

Links

Other bHLH family TFs
Other Ricinus communis TFs

234 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29216.m000261 Ricinus communis 29216.m000261 I 0.912
30149.m000231 Ricinus communis 30149.m000231 I 0.867
30169.m006403 Ricinus communis 30169.m006403 I 0.854
AMTR_s00070p00149100 Amborella trichopoda AMTR_s00070p00149100 I 0.847
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I 0.912
Aquca_058_00134 Aquilegia coerulea Aquca_058_00134 I 0.864
AT2G42280 Arabidopsis thaliana AT2G42280 D 0.854
AT2G43140 Arabidopsis thaliana AT2G43140 I 0.864
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.884
BGIOSGA028963 Oryza indica BGIOSGA028963 I 0.900
BGIOSGA031008 Oryza indica BGIOSGA031008 I 0.900
BHLH122 Arabidopsis thaliana AT1G51140 D 0.877
BHLH80 Arabidopsis thaliana AT1G35460 D 0.858
BHLH81 Arabidopsis thaliana AT4G09180 I 0.858
Bo3g036400 Brassica oleracea Bo3g036400 I 0.864
Bo4g019620 Brassica oleracea Bo4g019620 I 0.864
Bo4g191390 Brassica oleracea Bo4g191390 I 0.877
Bo6g024810 Brassica oleracea Bo6g024810 I 0.877
Bo6g043840 Brassica oleracea Bo6g043840 I 0.858
Bo8g026850 Brassica oleracea Bo8g026850 I 0.858
Bostr.1774s0027 Boechera stricta Bostr.1774s0027 I 0.858
Bostr.25463s0393 Boechera stricta Bostr.25463s0393 I 0.858
Bostr.25993s0461 Boechera stricta Bostr.25993s0461 I 0.864
Bostr.26675s0074 Boechera stricta Bostr.26675s0074 I 0.877
Bra000291 Brassica rapa Bra000291 I 0.864
Bra004748 Brassica rapa Bra004748 I 0.864
Bra016886 Brassica rapa Bra016886 I 0.877
Bra018896 Brassica rapa Bra018896 I 0.877
Bra028088 Brassica rapa Bra028088 I 0.858
Bra036760 Brassica rapa Bra036760 I 0.858
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I 0.900
Cagra.18223s0002 Capsella grandiflora Cagra.18223s0002 I 0.858
Cagra.2093s0006 Capsella grandiflora Cagra.2093s0006 I 0.877
Cagra.2636s0012 Capsella grandiflora Cagra.2636s0012 I 0.854
Cagra.3706s0004 Capsella grandiflora Cagra.3706s0004 I 0.864
Cagra.9781s0002 Capsella grandiflora Cagra.9781s0002 I 0.858
Carubv10001721m.g Capsella rubella Carubv10001721m.g I 0.858
Carubv10009458m.g Capsella rubella Carubv10009458m.g I 0.877
Carubv10010050m.g Capsella rubella Carubv10010050m.g I 0.858
Carubv10023498m.g Capsella rubella Carubv10023498m.g I 0.854
Carubv10023683m.g Capsella rubella Carubv10023683m.g I 0.864
cassava13743.valid.m1 Manihot esculenta cassava13743.valid.m1 I 0.858
cassava2126.valid.m1 Manihot esculenta cassava2126.valid.m1 I 0.912
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I 0.914
cassava30692.valid.m1 Manihot esculenta cassava30692.valid.m1 I 0.912
cassava35513.valid.m1 Manihot esculenta cassava35513.valid.m1 I 0.867
cassava35967.valid.m1 Manihot esculenta cassava35967.valid.m1 I 0.912
cassava36544.valid.m1 Manihot esculenta cassava36544.valid.m1 I 0.869
cassava44054.valid.m1 Manihot esculenta cassava44054.valid.m1 I 0.912
Ca_02662 Cicer arietinum Ca_02662 I 0.877
Ca_14223 Cicer arietinum Ca_14223 I 0.877
Ca_26916 Cicer arietinum Ca_26916 I 0.872
chr1.CM0318.250.nd Lotus japonicus chr1.CM0318.250.nd I 0.850
chr5.LjT42F22.20.nc Lotus japonicus chr5.LjT42F22.20.nc I 0.864
Ciclev10002083m.g Citrus clementina Ciclev10002083m.g I 0.858
Ciclev10005233m.g Citrus clementina Ciclev10005233m.g I 0.912
Ciclev10015437m.g Citrus clementina Ciclev10015437m.g I 0.877
Ciclev10031622m.g Citrus clementina Ciclev10031622m.g I 0.888
Cla015469 Citrullus lanatus Cla015469 I 0.872
Cla017792 Citrullus lanatus Cla017792 I 0.912
Cucsa.050160 Cucumis sativus Cucsa.050160 I 0.860
Cucsa.061590 Cucumis sativus Cucsa.061590 I 0.858
Cucsa.242910 Cucumis sativus Cucsa.242910 I 0.912
Eucgr.A02417 Eucalyptus grandis Eucgr.A02417 I 0.912
Eucgr.B03669 Eucalyptus grandis Eucgr.B03669 I 0.877
Eucgr.G03396 Eucalyptus grandis Eucgr.G03396 I 0.856
Eucgr.J00796 Eucalyptus grandis Eucgr.J00796 I 0.865
evm.TU.contig_45766 Carica papaya evm.TU.contig_45766 I 0.863
evm.TU.supercontig_84.89 Carica papaya evm.TU.supercontig_84.89 I 0.912
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.899
e_gw1.34.393.1 Physcomitrella patens e_gw1.34.393.1 I 0.866
F775_24151 Aegilops tauschii F775_24151 I 0.900
fgenesh2_kg.1__4183__AT1G51140.1 Arabidopsis lyrata fgenesh2_kg.1__4183__AT1G51140.1 I 0.877
fgenesh2_kg.4__2475__AT2G43140.1 Arabidopsis lyrata fgenesh2_kg.4__2475__AT2G43140.1 I 0.864
fgenesh2_kg.6__2924__AT4G09180.1 Arabidopsis lyrata fgenesh2_kg.6__2924__AT4G09180.1 I 0.858
gene00545-v1.0-hybrid Fragaria vesca gene00545-v1.0-hybrid I 0.912
gene20622-v1.0-hybrid Fragaria vesca gene20622-v1.0-hybrid I 0.912
gene26880-v1.0-hybrid Fragaria vesca gene26880-v1.0-hybrid I 0.858
gene26967-v1.0-hybrid Fragaria vesca gene26967-v1.0-hybrid I 0.888
GLYMA02G29830 Glycine max GLYMA02G29830 I 0.882
GLYMA08G16190 Glycine max GLYMA08G16190 I 0.860
GLYMA08G26110 Glycine max GLYMA08G26110 I 0.858
GLYMA10G12150 Glycine max GLYMA10G12150 I 0.912
GLYMA11G13960 Glycine max GLYMA11G13960 I 0.877
GLYMA12G05930 Glycine max GLYMA12G05930 I 0.877
GLYMA12G36750 Glycine max GLYMA12G36750 I 0.839
GLYMA13G27455 Glycine max GLYMA13G27455 I 0.839
GLYMA13G41670 Glycine max GLYMA13G41670 I 0.877
GLYMA15G03740 Glycine max GLYMA15G03740 I 0.877
GLYMA15G42680 Glycine max GLYMA15G42680 I 0.847
GLYMA20G39220 Glycine max GLYMA20G39220 I 0.864
Gorai.002G228900 Gossypium raimondii Gorai.002G228900 I 0.912
Gorai.004G035800 Gossypium raimondii Gorai.004G035800 I 0.893
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I 0.912
Gorai.009G071900 Gossypium raimondii Gorai.009G071900 I 0.877
Gorai.011G144600 Gossypium raimondii Gorai.011G144600 I 0.864
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I 0.858
GRMZM2G085467 Zea mays GRMZM2G085467 I 0.865
GRMZM2G417597 Zea mays GRMZM2G417597 I 0.865
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.884
GSMUA_Achr3G11110_001 Musa acuminata GSMUA_Achr3G11110_001 I 0.865
GSMUA_Achr5G22310_001 Musa acuminata GSMUA_Achr5G22310_001 I 0.912
GSMUA_Achr6G21220_001 Musa acuminata GSMUA_Achr6G21220_001 I 0.873
GSMUA_Achr7G20490_001 Musa acuminata GSMUA_Achr7G20490_001 I 0.901
GSMUA_Achr9G27780_001 Musa acuminata GSMUA_Achr9G27780_001 I 0.877
gw1.185.89.1 Physcomitrella patens gw1.185.89.1 I 0.878
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.884
LPERR08G16800 Leersia perrieri LPERR08G16800 I 0.842
LPERR09G10800 Leersia perrieri LPERR09G10800 I 0.842
Lus10021023.g Linum usitatissimum Lus10021023.g I 0.912
Lus10031255.g Linum usitatissimum Lus10031255.g I 0.912
Lus10031826.g Linum usitatissimum Lus10031826.g I 0.912
MDP0000180376 Malus domestica MDP0000180376 I 0.912
MDP0000269890 Malus domestica MDP0000269890 I 0.858
MDP0000273574 Malus domestica MDP0000273574 I 0.864
MDP0000307685 Malus domestica MDP0000307685 I 0.854
mgf002701m Mimulus guttatus mgf002701m I 0.858
mgf005043m Mimulus guttatus mgf005043m I 0.864
mgf016734m Mimulus guttatus mgf016734m I 0.912
mgf018372m Mimulus guttatus mgf018372m N 0.847
MLOC_67834 Hordeum vulgare MLOC_67834 I 0.900
MTR_2g098310 Medicago truncatula MTR_2g098310 I 0.877
MTR_3g027650 Medicago truncatula MTR_3g027650 I 0.839
MTR_3g028520 Medicago truncatula MTR_3g028520 I 0.839
OB02G30670 Oryza brachyantha OB02G30670 I 0.884
OB08G26810 Oryza brachyantha OB08G26810 I 0.900
OBART02G23210 Oryza barthii OBART02G23210 I 0.884
OBART08G19860 Oryza barthii OBART08G19860 I 0.900
OBART09G14660 Oryza barthii OBART09G14660 I 0.900
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I 0.900
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I 0.900
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.884
OLONG_017566 Oryza longistaminata OLONG_017566 I 0.900
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.884
OMERI08G16700 Oryza meridionalis OMERI08G16700 I 0.900
OMERI09G11370 Oryza meridionalis OMERI09G11370 I 0.900
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.884
ONIVA08G17500 Oryza nivara ONIVA08G17500 I 0.900
ONIVA08G22410 Oryza nivara ONIVA08G22410 I 0.900
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.884
OPUNC08G18020 Oryza punctata OPUNC08G18020 I 0.900
OPUNC09G13060 Oryza punctata OPUNC09G13060 I 0.900
orange1.1g015337m.g Citrus sinensis orange1.1g015337m.g I 0.877
orange1.1g016638m.g Citrus sinensis orange1.1g016638m.g I 0.888
orange1.1g018007m.g Citrus sinensis orange1.1g018007m.g I 0.912
orange1.1g023215m.g Citrus sinensis orange1.1g023215m.g I 0.858
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.884
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I 0.900
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I 0.900
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.884
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I 0.900
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I 0.900
OS08G0506700 Oryza sativa OS08G0506700 D 0.900
OS09G0487900 Oryza sativa OS09G0487900 I 0.900
Pavir.Aa01423 Panicum virgatum Pavir.Aa01423 I 0.873
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.884
Pavir.Ba01718 Panicum virgatum Pavir.Ba01718 I 0.865
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.884
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.884
Pavir.J00377 Panicum virgatum Pavir.J00377 I 0.865
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.884
Pavir.J14004 Panicum virgatum Pavir.J14004 I 0.865
PDK_20s1302565g001 Phoenix dactylifera PDK_20s1302565g001 I 0.855
PDK_20s1391471g001 Phoenix dactylifera PDK_20s1391471g001 I 0.912
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.897
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.897
PGSC0003DMG400006569 Solanum tuberosum PGSC0003DMG400006569 I 0.864
PGSC0003DMG400008153 Solanum tuberosum PGSC0003DMG400008153 I 0.912
PGSC0003DMG400022058 Solanum tuberosum PGSC0003DMG400022058 I 0.846
PGSC0003DMG400023852 Solanum tuberosum PGSC0003DMG400023852 I 0.855
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I 0.914
PGSC0003DMG400031314 Solanum tuberosum PGSC0003DMG400031314 I 0.858
PK06301.1 Cannabis sativa PK06301.1 I 0.858
PK07850.1 Cannabis sativa PK07850.1 I 0.864
PK14093.1 Cannabis sativa PK14093.1 I 0.844
PK18038.1 Cannabis sativa PK18038.1 I 0.912
PK20089.1 Cannabis sativa PK20089.1 I 0.877
Pm000447 Prunus mume Pm000447 I 0.912
Pm004181 Prunus mume Pm004181 I 0.858
Pm007619 Prunus mume Pm007619 I 0.864
Pm016406 Prunus mume Pm016406 I 0.875
Pm025821 Prunus mume Pm025821 I 0.912
POPTR_0001s27680 Populus trichocarpa POPTR_0001s27680 I 0.860
POPTR_0003s22290 Populus trichocarpa POPTR_0003s22290 I 0.854
POPTR_0006s05640 Populus trichocarpa POPTR_0006s05640 I 0.912
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I 0.914
POPTR_0016s05100 Populus trichocarpa POPTR_0016s05100 I 0.912
PRUPE_ppa006134mg Prunus persica PRUPE_ppa006134mg I 0.875
PRUPE_ppa006295mg Prunus persica PRUPE_ppa006295mg I 0.912
PRUPE_ppa011017mg Prunus persica PRUPE_ppa011017mg I 0.858
PRUPE_ppa019977mg Prunus persica PRUPE_ppa019977mg I 0.912
PRUPE_ppa025178mg Prunus persica PRUPE_ppa025178mg I 0.864
SapurV1A.0009s0400 Salix purpurea SapurV1A.0009s0400 I 0.854
SapurV1A.0018s0320 Salix purpurea SapurV1A.0018s0320 I 0.912
SapurV1A.0027s0090 Salix purpurea SapurV1A.0027s0090 I 0.884
SapurV1A.0071s0010 Salix purpurea SapurV1A.0071s0010 I 0.843
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.902
SapurV1A.0133s0050 Salix purpurea SapurV1A.0133s0050 I 0.912
SapurV1A.0391s0050 Salix purpurea SapurV1A.0391s0050 I 0.858
SapurV1A.0402s0180 Salix purpurea SapurV1A.0402s0180 I 0.843
SapurV1A.0529s0060 Salix purpurea SapurV1A.0529s0060 I 0.864
SapurV1A.0690s0120 Salix purpurea SapurV1A.0690s0120 I 0.858
SapurV1A.1647s0020 Salix purpurea SapurV1A.1647s0020 I 0.858
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.902
Sb02g028300 Sorghum bicolor Sb02g028300 I 0.865
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.884
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.884
scaffold_103992.1 Arabidopsis lyrata scaffold_103992.1 I 0.858
scaffold_403077.1 Arabidopsis lyrata scaffold_403077.1 I 0.854
Si010513m.g Setaria italica Si010513m.g I 0.884
Si017194m.g Setaria italica Si017194m.g I 0.854
Si029614m.g Setaria italica Si029614m.g I 0.865
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I 0.914
Solyc06g065040.2 Solanum lycopersicum Solyc06g065040.2 I 0.858
Solyc09g098110.2 Solanum lycopersicum Solyc09g098110.2 I 0.864
Solyc10g079050.1 Solanum lycopersicum Solyc10g079050.1 I 0.912
Solyc11g056650.1 Solanum lycopersicum Solyc11g056650.1 I 0.846
Solyc12g100140.1 Solanum lycopersicum Solyc12g100140.1 I 0.855
TCM_005925 Theobroma cacao TCM_005925 I 0.893
TCM_020066 Theobroma cacao TCM_020066 I 0.864
TCM_024842 Theobroma cacao TCM_024842 I 0.912
TCM_036484 Theobroma cacao TCM_036484 I 0.858
TCM_040564 Theobroma cacao TCM_040564 I 0.877
Thhalv10011463m.g Eutrema salsugineum Thhalv10011463m.g I 0.877
Thhalv10016998m.g Eutrema salsugineum Thhalv10016998m.g I 0.864
Thhalv10028883m.g Eutrema salsugineum Thhalv10028883m.g I 0.858
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I 0.900
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I 0.900
TRIUR3_26625 Triticum urartu TRIUR3_26625 I 0.900
VIT_05s0124g00240 Vitis vinifera VIT_05s0124g00240 I 0.864
VIT_06s0004g01740 Vitis vinifera VIT_06s0004g01740 I 0.854
VIT_08s0007g07810 Vitis vinifera VIT_08s0007g07810 I 0.912
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I 0.914
VIT_18s0041g00690 Vitis vinifera VIT_18s0041g00690 I 0.858