cassava18573.valid.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava18573.valid.m1 T047968_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava18573.valid.m1 bHLH 179 226

Links

Other bHLH family TFs
Other Manihot esculenta TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29598.m000464 Ricinus communis 29598.m000464 N 0.914
29883.m001988 Ricinus communis 29883.m001988 N 0.872
Aquca_017_00590 Aquilegia coerulea Aquca_017_00590 N 0.884
AT1G03040 Arabidopsis thaliana AT1G03040 N 0.902
BGIOSGA013729 Oryza indica BGIOSGA013729 I 0.873
BGIOSGA025266 Oryza indica BGIOSGA025266 I 0.873
Bo01031s030 Brassica oleracea Bo01031s030 N 0.902
Bo2g100750 Brassica oleracea Bo2g100750 N 0.902
Bo5g003580 Brassica oleracea Bo5g003580 N 0.902
Bo9g005930 Brassica oleracea Bo9g005930 N 0.902
Bostr.2983s0202 Boechera stricta Bostr.2983s0202 N 0.902
Bra000872 Brassica rapa Bra000872 N 0.902
Bra018539 Brassica rapa Bra018539 N 0.902
Bra033368 Brassica rapa Bra033368 N 0.902
Bra036256 Brassica rapa Bra036256 N 0.902
BRADI1G05430 Brachypodium distachyon BRADI1G05430 I 0.873
BRADI1G55427 Brachypodium distachyon BRADI1G55427 I 0.873
Cagra.0635s0023 Capsella grandiflora Cagra.0635s0023 N 0.902
Cagra.0897s0074 Capsella grandiflora Cagra.0897s0074 N 0.902
Carubv10001523m.g Capsella rubella Carubv10001523m.g N 0.902
Carubv10009831m.g Capsella rubella Carubv10009831m.g N 0.902
cassava22704.valid.m1 Manihot esculenta cassava22704.valid.m1 N 0.901
cassava36725.valid.m1 Manihot esculenta cassava36725.valid.m1 N 0.872
Ca_03755 Cicer arietinum Ca_03755 N 0.884
Ca_07790 Cicer arietinum Ca_07790 N 0.872
Ca_12194 Cicer arietinum Ca_12194 N 0.872
chr1.CM0375.380.nc Lotus japonicus chr1.CM0375.380.nc N 0.872
chr5.LjT29J15.30.nc Lotus japonicus chr5.LjT29J15.30.nc N 0.871
Ciclev10001768m.g Citrus clementina Ciclev10001768m.g N 0.864
Ciclev10021443m.g Citrus clementina Ciclev10021443m.g N 0.872
Cla011475 Citrullus lanatus Cla011475 N 0.884
Cla015040 Citrullus lanatus Cla015040 N 0.872
Cucsa.289090 Cucumis sativus Cucsa.289090 N 0.884
Cucsa.388780 Cucumis sativus Cucsa.388780 N 0.872
Eucgr.B01487 Eucalyptus grandis Eucgr.B01487 N 0.872
Eucgr.H04337 Eucalyptus grandis Eucgr.H04337 N 0.884
evm.TU.supercontig_117.94 Carica papaya evm.TU.supercontig_117.94 N 0.884
F775_30957 Aegilops tauschii F775_30957 I 0.846
fgenesh2_kg.1__235__AT1G03040.1 Arabidopsis lyrata fgenesh2_kg.1__235__AT1G03040.1 N 0.902
gene08188-v1.0-hybrid Fragaria vesca gene08188-v1.0-hybrid N 0.861
gene16564-v1.0-hybrid Fragaria vesca gene16564-v1.0-hybrid N 0.884
GLYMA02G16110 Glycine max GLYMA02G16110 N 0.872
GLYMA03G31510 Glycine max GLYMA03G31510 N 0.872
GLYMA10G03690 Glycine max GLYMA10G03690 N 0.872
GLYMA10G30430 Glycine max GLYMA10G30430 N 0.884
GLYMA19G34360 Glycine max GLYMA19G34360 N 0.872
GLYMA20G36770 Glycine max GLYMA20G36770 N 0.884
Gorai.001G242500 Gossypium raimondii Gorai.001G242500 N 0.872
Gorai.004G075200 Gossypium raimondii Gorai.004G075200 N 0.846
Gorai.004G218900 Gossypium raimondii Gorai.004G218900 N 0.846
Gorai.007G141800 Gossypium raimondii Gorai.007G141800 N 0.872
Gorai.007G277200 Gossypium raimondii Gorai.007G277200 N 0.884
GRMZM2G004356 Zea mays GRMZM2G004356 I 0.873
GRMZM2G162382 Zea mays GRMZM2G162382 I 0.873
GSMUA_Achr4G21070_001 Musa acuminata GSMUA_Achr4G21070_001 I 0.861
GSMUA_Achr5G03100_001 Musa acuminata GSMUA_Achr5G03100_001 I 0.861
GSMUA_Achr9G25560_001 Musa acuminata GSMUA_Achr9G25560_001 I 0.861
LPERR03G31640 Leersia perrieri LPERR03G31640 I 0.873
LPERR07G04600 Leersia perrieri LPERR07G04600 I 0.873
Lus10006587.g Linum usitatissimum Lus10006587.g N 0.914
Lus10015909.g Linum usitatissimum Lus10015909.g N 0.914
MDP0000176749 Malus domestica MDP0000176749 N 0.861
MDP0000295593 Malus domestica MDP0000295593 N 0.884
mgf001465m Mimulus guttatus mgf001465m N 0.846
MTR_1g070870 Medicago truncatula MTR_1g070870 N 0.872
MTR_1g080890 Medicago truncatula MTR_1g080890 N 0.884
OB07G13990 Oryza brachyantha OB07G13990 I 0.873
OBART03G37400 Oryza barthii OBART03G37400 I 0.873
OBART07G05280 Oryza barthii OBART07G05280 I 0.873
OGLUM03G37150 Oryza glumaepatula OGLUM03G37150 I 0.873
OGLUM07G04790 Oryza glumaepatula OGLUM07G04790 I 0.873
OLONG_014165 Oryza longistaminata OLONG_014165 I 0.873
OMERI03G34570 Oryza meridionalis OMERI03G34570 I 0.873
OMERI05G15760 Oryza meridionalis OMERI05G15760 I 0.873
ONIVA03G38760 Oryza nivara ONIVA03G38760 I 0.873
ONIVA07G04020 Oryza nivara ONIVA07G04020 I 0.873
OPUNC03G34510 Oryza punctata OPUNC03G34510 I 0.873
OPUNC07G05040 Oryza punctata OPUNC07G05040 I 0.873
orange1.1g022649m.g Citrus sinensis orange1.1g022649m.g N 0.872
ORGLA06G0244900 Oryza glaberrima ORGLA06G0244900 I 0.873
ORGLA07G0044500 Oryza glaberrima ORGLA07G0044500 I 0.873
ORUFI07G05060 Oryza rufipogon ORUFI07G05060 I 0.873
OS03G0797600 Oryza sativa OS03G0797600 I 0.873
Pavir.Ba03672 Panicum virgatum Pavir.Ba03672 I 0.873
Pavir.J00283 Panicum virgatum Pavir.J00283 I 0.873
Pavir.J03221 Panicum virgatum Pavir.J03221 I 0.873
Pavir.J04249 Panicum virgatum Pavir.J04249 I 0.873
PGSC0003DMG400006089 Solanum tuberosum PGSC0003DMG400006089 N 0.861
PGSC0003DMG400013393 Solanum tuberosum PGSC0003DMG400013393 N 0.861
PGSC0003DMG400019334 Solanum tuberosum PGSC0003DMG400019334 N 0.846
PK20184.1 Cannabis sativa PK20184.1 N 0.884
PK25419.1 Cannabis sativa PK25419.1 N 0.872
Pm003525 Prunus mume Pm003525 N 0.884
Pm020229 Prunus mume Pm020229 N 0.861
POPTR_0002s04620 Populus trichocarpa POPTR_0002s04620 N 0.872
POPTR_0005s05500 Populus trichocarpa POPTR_0005s05500 N 0.878
POPTR_0005s23930 Populus trichocarpa POPTR_0005s23930 N 0.846
PRUPE_ppa008172mg Prunus persica PRUPE_ppa008172mg N 0.884
PRUPE_ppa009299mg Prunus persica PRUPE_ppa009299mg N 0.861
SapurV1A.0006s1290 Salix purpurea SapurV1A.0006s1290 N 0.872
SapurV1A.0110s0180 Salix purpurea SapurV1A.0110s0180 N 0.854
SapurV1A.0729s0150 Salix purpurea SapurV1A.0729s0150 N 0.878
SapurV1A.0860s0050 Salix purpurea SapurV1A.0860s0050 N 0.846
Sb01g005130 Sorghum bicolor Sb01g005130 I 0.846
Sb02g004570 Sorghum bicolor Sb02g004570 I 0.873
Si030704m.g Setaria italica Si030704m.g I 0.873
Si036929m.g Setaria italica Si036929m.g I 0.873
Solyc03g005350.2 Solanum lycopersicum Solyc03g005350.2 N 0.859
Solyc09g065820.2 Solanum lycopersicum Solyc09g065820.2 N 0.846
Solyc09g083220.2 Solanum lycopersicum Solyc09g083220.2 N 0.861
TCM_004217 Theobroma cacao TCM_004217 N 0.872
TCM_026346 Theobroma cacao TCM_026346 N 0.884
Thhalv10008279m.g Eutrema salsugineum Thhalv10008279m.g N 0.902
Thhalv10028824m.g Eutrema salsugineum Thhalv10028824m.g N 0.902
Traes_5BL_DB5410008 Triticum aestivum Traes_5BL_DB5410008 I 0.846
Traes_5DL_1CD573458 Triticum aestivum Traes_5DL_1CD573458 I 0.846
UNE12 Arabidopsis thaliana AT4G02590 N 0.902
UNE12 Arabidopsis lyrata fgenesh2_kg.6__3435__AT4G02590.2 N 0.902
VIT_05s0020g04620 Vitis vinifera VIT_05s0020g04620 N 0.884
VIT_07s0141g00220 Vitis vinifera VIT_07s0141g00220 N 0.872
VIT_14s0030g02230 Vitis vinifera VIT_14s0030g02230 N 0.884