cassava18812.valid.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava18812.valid.m1 T047969_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK20225.1
M01128_2.00
Cannabis sativa
NCACGTGVN

NBCACGTGN
PBM
Lambert et al.(2019)
pTH11274
0.882 0.857
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava18812.valid.m1 bHLH 75 123

Links

Other bHLH family TFs
Other Manihot esculenta TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29813.m001508 Ricinus communis 29813.m001508 I 0.000
30138.m004061 Ricinus communis 30138.m004061 I 0.000
AGL30 Arabidopsis lyrata Al_scaffold_0005_228 I 0.000
AMTR_s00010p00264750 Amborella trichopoda AMTR_s00010p00264750 I 0.000
Aquca_002_00641 Aquilegia coerulea Aquca_002_00641 I 0.000
AGL65 Arabidopsis thaliana AT1G18750 D 0.000
AGL30 Arabidopsis thaliana AT2G03060 I 0.000
Bo8g068060 Brassica oleracea Bo8g068060 I 0.000
Bo8g104060 Brassica oleracea Bo8g104060 I 0.000
Bostr.0556s0119 Boechera stricta Bostr.0556s0119 I 0.000
Bostr.10273s0411 Boechera stricta Bostr.10273s0411 I 0.000
Bostr.7128s0485 Boechera stricta Bostr.7128s0485 I 0.000
Bra016544 Brassica rapa Bra016544 I 0.000
Bra025685 Brassica rapa Bra025685 I 0.000
Bra031049 Brassica rapa Bra031049 I 0.000
BRADI4G11097 Brachypodium distachyon BRADI4G11097 I 0.000
Cagra.0534s0009 Capsella grandiflora Cagra.0534s0009 I 0.000
Cagra.0887s0001 Capsella grandiflora Cagra.0887s0001 I 0.000
Cagra.4153s0004 Capsella grandiflora Cagra.4153s0004 I 0.000
Carubv10009419m.g Capsella rubella Carubv10009419m.g I 0.000
Carubv10017440m.g Capsella rubella Carubv10017440m.g I 0.000
Carubv10020210m.g Capsella rubella Carubv10020210m.g I 0.000
cassava19791.m1 Manihot esculenta cassava19791.m1 I 0.000
cassava46162.m1 Manihot esculenta cassava46162.m1 I 0.000
chr4.CM0087.920.nd Lotus japonicus chr4.CM0087.920.nd I 0.000
Ciclev10020575m.g Citrus clementina Ciclev10020575m.g I 0.000
Cla010361 Citrullus lanatus Cla010361 I 0.000
Cucsa.284960 Cucumis sativus Cucsa.284960 I 0.000
Eucgr.B00522 Eucalyptus grandis Eucgr.B00522 I 0.000
F775_13266 Aegilops tauschii F775_13266 I 0.000
gene26028-v1.0-hybrid Fragaria vesca gene26028-v1.0-hybrid I 0.000
GLYMA17G10941 Glycine max GLYMA17G10941 I 0.000
Gorai.001G074200 Gossypium raimondii Gorai.001G074200 I 0.000
Gorai.008G194100 Gossypium raimondii Gorai.008G194100 I 0.000
GRMZM2G441115 Zea mays GRMZM2G441115 I 0.000
GSMUA_Achr2G01740_001 Musa acuminata GSMUA_Achr2G01740_001 I 0.000
GSMUA_Achr3G24170_001 Musa acuminata GSMUA_Achr3G24170_001 I 0.000
LjSGA_031058.2 Lotus japonicus LjSGA_031058.2 I 0.000
Lus10019089.g Linum usitatissimum Lus10019089.g I 0.000
Lus10034464.g Linum usitatissimum Lus10034464.g I 0.000
MDP0000146231 Malus domestica MDP0000146231 I 0.000
MDP0000146415 Malus domestica MDP0000146415 I 0.000
MDP0000147667 Malus domestica MDP0000147667 I 0.000
MDP0000193129 Malus domestica MDP0000193129 I 0.000
MDP0000773068 Malus domestica MDP0000773068 I 0.000
MDP0000919323 Malus domestica MDP0000919323 I 0.000
mgf000945m Mimulus guttatus mgf000945m I 0.000
mgf004425m Mimulus guttatus mgf004425m I 0.000
MLOC_11474 Hordeum vulgare MLOC_11474 I 0.000
MTR_4g108720 Medicago truncatula MTR_4g108720 I 0.000
orange1.1g017511m.g Citrus sinensis orange1.1g017511m.g I 0.000
Pavir.Hb00170 Panicum virgatum Pavir.Hb00170 I 0.000
Pavir.J04162 Panicum virgatum Pavir.J04162 I 0.000
PDK_20s1342861g001 Phoenix dactylifera PDK_20s1342861g001 I 0.000
PDK_20s1352301g001 Phoenix dactylifera PDK_20s1352301g001 I 0.000
PK21701.1 Cannabis sativa PK21701.1 I 0.000
Pm006479 Prunus mume Pm006479 I 0.000
Pm024895 Prunus mume Pm024895 I 0.000
PRUPE_ppa015857mg Prunus persica PRUPE_ppa015857mg I 0.000
PRUPE_ppa017562mg Prunus persica PRUPE_ppa017562mg I 0.000
Sb05g025970 Sorghum bicolor Sb05g025970 I 0.000
Solyc03g115910.1 Solanum lycopersicum Solyc03g115910.1 I 0.000
TCM_011687 Theobroma cacao TCM_011687 I 0.000
TCM_014051 Theobroma cacao TCM_014051 I 0.000
Thhalv10004409m.g Eutrema salsugineum Thhalv10004409m.g I 0.000
Thhalv10007954m.g Eutrema salsugineum Thhalv10007954m.g I 0.000
Thhalv10018691m.g Eutrema salsugineum Thhalv10018691m.g I 0.000
Thhalv10019726m.g Eutrema salsugineum Thhalv10019726m.g I 0.000
Thhalv10019839m.g Eutrema salsugineum Thhalv10019839m.g I 0.000
Traes_4AL_8DBE120BC Triticum aestivum Traes_4AL_8DBE120BC I 0.000
Traes_4BS_8B4AFA7C2 Triticum aestivum Traes_4BS_8B4AFA7C2 I 0.000
Traes_4DS_4C4EB1D21 Triticum aestivum Traes_4DS_4C4EB1D21 I 0.000
TRIUR3_33223 Triticum urartu TRIUR3_33223 I 0.000
AGL65 Vitis vinifera VIT_17s0000g06340 I 0.000