cassava18812.valid.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava18812.valid.m1 T047969_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK20225.1
M01128_2.00
Cannabis sativa
NCACGTGVN

NBCACGTGN
PBM
Lambert et al.(2019)
pTH11274
0.882 0.857
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava18812.valid.m1 bHLH 75 123

Links

Other bHLH family TFs
Other Manihot esculenta TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29900.m001610 Ricinus communis 29900.m001610 I 0.888
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I 0.854
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.865
BGIOSGA002833 Oryza indica BGIOSGA002833 N 0.839
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.874
BHLH106 Arabidopsis thaliana AT2G41130 N 0.846
Bo3g035410 Brassica oleracea Bo3g035410 N 0.846
Bo4g012960 Brassica oleracea Bo4g012960 N 0.846
Bo4g112750 Brassica oleracea Bo4g112750 N 0.843
Bo4g190700 Brassica oleracea Bo4g190700 N 0.846
Bostr.9345s0019 Boechera stricta Bostr.9345s0019 N 0.846
Bra004599 Brassica rapa Bra004599 N 0.846
Bra014672 Brassica rapa Bra014672 N 0.843
Bra016951 Brassica rapa Bra016951 N 0.846
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.842
BRADI2G07050 Brachypodium distachyon BRADI2G07050 N 0.865
Cagra.0578s0007 Capsella grandiflora Cagra.0578s0007 N 0.846
Cagra.1642s0077 Capsella grandiflora Cagra.1642s0077 N 0.846
Carubv10017947m.g Capsella rubella Carubv10017947m.g N 0.846
Carubv10023903m.g Capsella rubella Carubv10023903m.g N 0.846
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.912
Ca_06386 Cicer arietinum Ca_06386 I 0.861
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.882
Cla019977 Citrullus lanatus Cla019977 I 0.867
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.867
Eucgr.D00509 Eucalyptus grandis Eucgr.D00509 I 0.840
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.880
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.882
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.885
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.861
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.882
GLYMA12G33751 Glycine max GLYMA12G33751 I 0.847
GLYMA13G36741 Glycine max GLYMA13G36741 I 0.847
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.912
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.870
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.885
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.842
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.885
GRMZM2G369629 Zea mays GRMZM2G369629 N 0.839
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.842
GSMUA_Achr2G20040_001 Musa acuminata GSMUA_Achr2G20040_001 N 0.852
GSMUA_Achr3G03510_001 Musa acuminata GSMUA_Achr3G03510_001 N 0.844
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.844
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.842
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.882
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.884
MDP0000249969 Malus domestica MDP0000249969 I 0.891
MDP0000256492 Malus domestica MDP0000256492 N 0.864
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.885
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.861
OB01G13800 Oryza brachyantha OB01G13800 N 0.839
OB01G17480 Oryza brachyantha OB01G17480 I 0.874
OB03G21490 Oryza brachyantha OB03G21490 I 0.842
OBART01G03950 Oryza barthii OBART01G03950 N 0.839
OBART03G11320 Oryza barthii OBART03G11320 I 0.842
OGLUM01G04250 Oryza glumaepatula OGLUM01G04250 N 0.839
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.874
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.842
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.842
OMERI01G03850 Oryza meridionalis OMERI01G03850 N 0.839
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.874
ONIVA01G04390 Oryza nivara ONIVA01G04390 N 0.839
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.874
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.842
OPUNC01G03610 Oryza punctata OPUNC01G03610 N 0.839
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.874
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.882
ORGLA01G0034700 Oryza glaberrima ORGLA01G0034700 N 0.839
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.874
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.842
ORUFI01G04050 Oryza rufipogon ORUFI01G04050 N 0.839
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.874
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.842
OS01G0218100 Oryza sativa OS01G0218100 I 0.874
OS03G0260600 Oryza sativa OS03G0260600 I 0.842
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.885
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.885
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.842
Pavir.J32610 Panicum virgatum Pavir.J32610 N 0.839
PK20225.1 Cannabis sativa PK20225.1 D 0.882
PRUPE_ppa021837mg Prunus persica PRUPE_ppa021837mg N 0.864
SapurV1A.0029s0640 Salix purpurea SapurV1A.0029s0640 N 0.864
SapurV1A.0189s0140 Salix purpurea SapurV1A.0189s0140 N 0.846
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.870
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.870
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.842
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.885
Sb03g005250 Sorghum bicolor Sb03g005250 N 0.839
Sb09g004820 Sorghum bicolor Sb09g004820 N 0.839
Si002517m.g Setaria italica Si002517m.g I 0.873
Si012213m.g Setaria italica Si012213m.g N 0.839
Si039730m.g Setaria italica Si039730m.g I 0.842
TCM_029711 Theobroma cacao TCM_029711 I 0.912
Thhalv10006410m.g Eutrema salsugineum Thhalv10006410m.g N 0.846
Thhalv10017546m.g Eutrema salsugineum Thhalv10017546m.g N 0.846
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.885
Traes_5BL_CBFAD4B59 Triticum aestivum Traes_5BL_CBFAD4B59 N 0.846
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.912