cassava22704.valid.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava22704.valid.m1 T047998_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava22704.valid.m1 bHLH 175 222

Links

Other bHLH family TFs
Other Manihot esculenta TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava18573.valid.m1 Manihot esculenta cassava18573.valid.m1 N 0.901
29598.m000464 Ricinus communis 29598.m000464 N 0.901
Lus10006587.g Linum usitatissimum Lus10006587.g N 0.901
Lus10015909.g Linum usitatissimum Lus10015909.g N 0.901
AT1G03040 Arabidopsis thaliana AT1G03040 N 0.890
Carubv10001523m.g Capsella rubella Carubv10001523m.g N 0.890
UNE12 Arabidopsis lyrata fgenesh2_kg.6__3435__AT4G02590.2 N 0.890
Cagra.0897s0074 Capsella grandiflora Cagra.0897s0074 N 0.890
Carubv10009831m.g Capsella rubella Carubv10009831m.g N 0.890
UNE12 Arabidopsis thaliana AT4G02590 N 0.890
Bostr.2983s0202 Boechera stricta Bostr.2983s0202 N 0.890
Cagra.0635s0023 Capsella grandiflora Cagra.0635s0023 N 0.890
Bo01031s030 Brassica oleracea Bo01031s030 N 0.890
fgenesh2_kg.1__235__AT1G03040.1 Arabidopsis lyrata fgenesh2_kg.1__235__AT1G03040.1 N 0.890
Bo9g005930 Brassica oleracea Bo9g005930 N 0.890
Bo5g003580 Brassica oleracea Bo5g003580 N 0.890
Bo2g100750 Brassica oleracea Bo2g100750 N 0.890
Thhalv10008279m.g Eutrema salsugineum Thhalv10008279m.g N 0.890
Bra000872 Brassica rapa Bra000872 N 0.890
Bra018539 Brassica rapa Bra018539 N 0.890
Thhalv10028824m.g Eutrema salsugineum Thhalv10028824m.g N 0.890
Bra036256 Brassica rapa Bra036256 N 0.890
Bra033368 Brassica rapa Bra033368 N 0.890
chr5.LjT29J15.30.nc Lotus japonicus chr5.LjT29J15.30.nc N 0.884
Aquca_017_00590 Aquilegia coerulea Aquca_017_00590 N 0.871
Cucsa.289090 Cucumis sativus Cucsa.289090 N 0.871
TCM_026346 Theobroma cacao TCM_026346 N 0.871
VIT_05s0020g04620 Vitis vinifera VIT_05s0020g04620 N 0.871
PRUPE_ppa008172mg Prunus persica PRUPE_ppa008172mg N 0.871
VIT_14s0030g02230 Vitis vinifera VIT_14s0030g02230 N 0.871
Ca_03755 Cicer arietinum Ca_03755 N 0.871
Cla011475 Citrullus lanatus Cla011475 N 0.871
Pm003525 Prunus mume Pm003525 N 0.871
Gorai.007G277200 Gossypium raimondii Gorai.007G277200 N 0.871
MDP0000295593 Malus domestica MDP0000295593 N 0.871
MTR_1g080890 Medicago truncatula MTR_1g080890 N 0.871
GLYMA20G36770 Glycine max GLYMA20G36770 N 0.871
GLYMA10G30430 Glycine max GLYMA10G30430 N 0.871
PK20184.1 Cannabis sativa PK20184.1 N 0.871
Eucgr.H04337 Eucalyptus grandis Eucgr.H04337 N 0.871
evm.TU.supercontig_117.94 Carica papaya evm.TU.supercontig_117.94 N 0.871
gene16564-v1.0-hybrid Fragaria vesca gene16564-v1.0-hybrid N 0.871
SapurV1A.0729s0150 Salix purpurea SapurV1A.0729s0150 N 0.865
POPTR_0005s05500 Populus trichocarpa POPTR_0005s05500 N 0.865
Sb02g004570 Sorghum bicolor Sb02g004570 I 0.860
Pavir.J04249 Panicum virgatum Pavir.J04249 I 0.860
Pavir.Ba03672 Panicum virgatum Pavir.Ba03672 I 0.860
Pavir.J00283 Panicum virgatum Pavir.J00283 I 0.860
Pavir.J03221 Panicum virgatum Pavir.J03221 I 0.860
Si036929m.g Setaria italica Si036929m.g I 0.860
Si030704m.g Setaria italica Si030704m.g I 0.860
OGLUM07G04790 Oryza glumaepatula OGLUM07G04790 I 0.860
OGLUM03G37150 Oryza glumaepatula OGLUM03G37150 I 0.860
OBART07G05280 Oryza barthii OBART07G05280 I 0.860
OLONG_014165 Oryza longistaminata OLONG_014165 I 0.860
OMERI03G34570 Oryza meridionalis OMERI03G34570 I 0.860
ONIVA03G38760 Oryza nivara ONIVA03G38760 I 0.860
OMERI05G15760 Oryza meridionalis OMERI05G15760 I 0.860
OB07G13990 Oryza brachyantha OB07G13990 I 0.860
LPERR07G04600 Leersia perrieri LPERR07G04600 I 0.860
BRADI1G05430 Brachypodium distachyon BRADI1G05430 I 0.860
BGIOSGA025266 Oryza indica BGIOSGA025266 I 0.860
BGIOSGA013729 Oryza indica BGIOSGA013729 I 0.860
BRADI1G55427 Brachypodium distachyon BRADI1G55427 I 0.860
GRMZM2G004356 Zea mays GRMZM2G004356 I 0.860
LPERR03G31640 Leersia perrieri LPERR03G31640 I 0.860
GRMZM2G162382 Zea mays GRMZM2G162382 I 0.860
ONIVA07G04020 Oryza nivara ONIVA07G04020 I 0.860
OBART03G37400 Oryza barthii OBART03G37400 I 0.860
ORUFI07G05060 Oryza rufipogon ORUFI07G05060 I 0.860
OPUNC07G05040 Oryza punctata OPUNC07G05040 I 0.860
ORGLA06G0244900 Oryza glaberrima ORGLA06G0244900 I 0.860
ORGLA07G0044500 Oryza glaberrima ORGLA07G0044500 I 0.860
OS03G0797600 Oryza sativa OS03G0797600 I 0.860
OPUNC03G34510 Oryza punctata OPUNC03G34510 I 0.860
TCM_004217 Theobroma cacao TCM_004217 N 0.859
Gorai.007G141800 Gossypium raimondii Gorai.007G141800 N 0.859
orange1.1g022649m.g Citrus sinensis orange1.1g022649m.g N 0.859
GLYMA19G34360 Glycine max GLYMA19G34360 N 0.859
GLYMA03G31510 Glycine max GLYMA03G31510 N 0.859
chr1.CM0375.380.nc Lotus japonicus chr1.CM0375.380.nc N 0.859
PK25419.1 Cannabis sativa PK25419.1 N 0.859
GLYMA02G16110 Glycine max GLYMA02G16110 N 0.859
SapurV1A.0006s1290 Salix purpurea SapurV1A.0006s1290 N 0.859
GLYMA10G03690 Glycine max GLYMA10G03690 N 0.859
Gorai.001G242500 Gossypium raimondii Gorai.001G242500 N 0.859
Ca_07790 Cicer arietinum Ca_07790 N 0.859
VIT_07s0141g00220 Vitis vinifera VIT_07s0141g00220 N 0.859
POPTR_0002s04620 Populus trichocarpa POPTR_0002s04620 N 0.859
Cla015040 Citrullus lanatus Cla015040 N 0.859
Cucsa.388780 Cucumis sativus Cucsa.388780 N 0.859
Ca_12194 Cicer arietinum Ca_12194 N 0.859
29883.m001988 Ricinus communis 29883.m001988 N 0.859
Eucgr.B01487 Eucalyptus grandis Eucgr.B01487 N 0.859
cassava36725.valid.m1 Manihot esculenta cassava36725.valid.m1 N 0.859
Ciclev10021443m.g Citrus clementina Ciclev10021443m.g N 0.859
MTR_1g070870 Medicago truncatula MTR_1g070870 N 0.859
Ciclev10001768m.g Citrus clementina Ciclev10001768m.g N 0.851
Pm020229 Prunus mume Pm020229 N 0.848
PGSC0003DMG400006089 Solanum tuberosum PGSC0003DMG400006089 N 0.848
PGSC0003DMG400013393 Solanum tuberosum PGSC0003DMG400013393 N 0.848
gene08188-v1.0-hybrid Fragaria vesca gene08188-v1.0-hybrid N 0.848
GSMUA_Achr9G25560_001 Musa acuminata GSMUA_Achr9G25560_001 I 0.848
PRUPE_ppa009299mg Prunus persica PRUPE_ppa009299mg N 0.848
MDP0000176749 Malus domestica MDP0000176749 N 0.848
GSMUA_Achr4G21070_001 Musa acuminata GSMUA_Achr4G21070_001 I 0.848
GSMUA_Achr5G03100_001 Musa acuminata GSMUA_Achr5G03100_001 I 0.848
Solyc09g083220.2 Solanum lycopersicum Solyc09g083220.2 N 0.848
Solyc03g005350.2 Solanum lycopersicum Solyc03g005350.2 N 0.846
SapurV1A.0110s0180 Salix purpurea SapurV1A.0110s0180 N 0.841