cassava32469.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava32469.m1 T048038_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava32469.m1 bHLH 92 143

Links

Other bHLH family TFs
Other Manihot esculenta TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29844.m003312 Ricinus communis 29844.m003312 N 0.852
29904.m002956 Ricinus communis 29904.m002956 N 0.849
30054.m000819 Ricinus communis 30054.m000819 N 0.849
30128.m008737 Ricinus communis 30128.m008737 N 0.846
30169.m006534 Ricinus communis 30169.m006534 N 0.914
AMTR_s00015p00239460 Amborella trichopoda AMTR_s00015p00239460 N 0.914
AMTR_s00089p00043950 Amborella trichopoda AMTR_s00089p00043950 N 0.849
Aquca_005_00478 Aquilegia coerulea Aquca_005_00478 N 0.846
Aquca_034_00130 Aquilegia coerulea Aquca_034_00130 N 0.849
Aquca_037_00084 Aquilegia coerulea Aquca_037_00084 N 0.884
Aquca_135_00008 Aquilegia coerulea Aquca_135_00008 N 0.851
AT1G22490 Arabidopsis thaliana AT1G22490 N 0.846
BGIOSGA006748 Oryza indica BGIOSGA006748 N 0.914
BGIOSGA023024 Oryza indica BGIOSGA023024 N 0.911
BGIOSGA030936 Oryza indica BGIOSGA030936 N 0.846
BHLH96 Arabidopsis thaliana AT1G72210 N 0.846
Bo1g101110 Brassica oleracea Bo1g101110 N 0.849
Bo1g150080 Brassica oleracea Bo1g150080 N 0.845
Bo2g046020 Brassica oleracea Bo2g046020 N 0.914
Bo3g022850 Brassica oleracea Bo3g022850 N 0.914
Bo3g060420 Brassica oleracea Bo3g060420 N 0.888
Bo3g082010 Brassica oleracea Bo3g082010 N 0.849
Bo5g038570 Brassica oleracea Bo5g038570 N 0.846
Bo5g144750 Brassica oleracea Bo5g144750 N 0.845
Bo6g092570 Brassica oleracea Bo6g092570 N 0.846
Bo6g114730 Brassica oleracea Bo6g114730 N 0.870
Bo7g037540 Brassica oleracea Bo7g037540 N 0.849
Bo7g057920 Brassica oleracea Bo7g057920 N 0.846
Bo8g071490 Brassica oleracea Bo8g071490 N 0.846
Bo9g110960 Brassica oleracea Bo9g110960 N 0.914
Bostr.10273s0131 Boechera stricta Bostr.10273s0131 N 0.846
Bostr.12659s0103 Boechera stricta Bostr.12659s0103 N 0.846
Bostr.19424s0222 Boechera stricta Bostr.19424s0222 N 0.849
Bostr.2570s0048 Boechera stricta Bostr.2570s0048 N 0.901
Bostr.26833s0957 Boechera stricta Bostr.26833s0957 N 0.914
Bra001183 Brassica rapa Bra001183 N 0.888
Bra001929 Brassica rapa Bra001929 N 0.849
Bra003073 Brassica rapa Bra003073 N 0.914
Bra003886 Brassica rapa Bra003886 N 0.846
Bra012329 Brassica rapa Bra012329 N 0.846
Bra016080 Brassica rapa Bra016080 N 0.846
Bra016377 Brassica rapa Bra016377 N 0.846
Bra020775 Brassica rapa Bra020775 N 0.845
Bra022638 Brassica rapa Bra022638 N 0.914
Bra028357 Brassica rapa Bra028357 N 0.849
Bra029088 Brassica rapa Bra029088 N 0.914
Bra040234 Brassica rapa Bra040234 N 0.845
Bra040856 Brassica rapa Bra040856 N 0.846
BRADI1G38650 Brachypodium distachyon BRADI1G38650 N 0.914
BRADI3G09670 Brachypodium distachyon BRADI3G09670 N 0.911
Cagra.0026s0026 Capsella grandiflora Cagra.0026s0026 N 0.849
Cagra.0084s0068 Capsella grandiflora Cagra.0084s0068 N 0.914
Cagra.0114s0053 Capsella grandiflora Cagra.0114s0053 N 0.846
Cagra.1772s0035 Capsella grandiflora Cagra.1772s0035 N 0.876
Cagra.4006s0007 Capsella grandiflora Cagra.4006s0007 N 0.846
Carubv10011476m.g Capsella rubella Carubv10011476m.g N 0.846
Carubv10012751m.g Capsella rubella Carubv10012751m.g N 0.876
Carubv10013821m.g Capsella rubella Carubv10013821m.g N 0.849
Carubv10020657m.g Capsella rubella Carubv10020657m.g N 0.846
Carubv10026630m.g Capsella rubella Carubv10026630m.g N 0.914
cassava11522.m1 Manihot esculenta cassava11522.m1 N 0.864
cassava13431.valid.m1 Manihot esculenta cassava13431.valid.m1 N 0.846
cassava19507.valid.m1 Manihot esculenta cassava19507.valid.m1 N 0.846
cassava22781.valid.m1 Manihot esculenta cassava22781.valid.m1 N 0.846
cassava27750.m1 Manihot esculenta cassava27750.m1 N 0.849
cassava27856.m1 Manihot esculenta cassava27856.m1 N 0.849
cassava31098.valid.m1 Manihot esculenta cassava31098.valid.m1 N 0.846
cassava3377.m1 Manihot esculenta cassava3377.m1 N 0.852
cassava35271.valid.m1 Manihot esculenta cassava35271.valid.m1 N 0.846
cassava7222.valid.m1 Manihot esculenta cassava7222.valid.m1 N 0.914
Ca_01181 Cicer arietinum Ca_01181 N 0.846
Ca_03951 Cicer arietinum Ca_03951 N 0.914
Ca_12363 Cicer arietinum Ca_12363 N 0.849
Ca_13080 Cicer arietinum Ca_13080 N 0.887
Ca_16010 Cicer arietinum Ca_16010 N 0.849
chr1.CM0544.580.nd Lotus japonicus chr1.CM0544.580.nd N 0.845
chr1.LjT16B05.110.nd Lotus japonicus chr1.LjT16B05.110.nd N 0.846
chr1.LjT40H13.220.nd Lotus japonicus chr1.LjT40H13.220.nd N 0.846
chr5.CM0211.190.nc Lotus japonicus chr5.CM0211.190.nc N 0.846
chr6.CM0139.250.nd Lotus japonicus chr6.CM0139.250.nd N 0.852
chr6.CM0738.340.nd Lotus japonicus chr6.CM0738.340.nd N 0.846
Ciclev10001811m.g Citrus clementina Ciclev10001811m.g N 0.846
Ciclev10005031m.g Citrus clementina Ciclev10005031m.g N 0.849
Ciclev10005947m.g Citrus clementina Ciclev10005947m.g N 0.852
Ciclev10007150m.g Citrus clementina Ciclev10007150m.g N 0.911
Cla004300 Citrullus lanatus Cla004300 N 0.902
Cla005338 Citrullus lanatus Cla005338 N 0.846
Cla016479 Citrullus lanatus Cla016479 N 0.860
Cla020173 Citrullus lanatus Cla020173 N 0.846
Cla021744 Citrullus lanatus Cla021744 N 0.849
Cla022458 Citrullus lanatus Cla022458 N 0.846
Cucsa.012930 Cucumis sativus Cucsa.012930 N 0.902
Cucsa.091670 Cucumis sativus Cucsa.091670 N 0.846
Cucsa.160250 Cucumis sativus Cucsa.160250 N 0.846
Cucsa.163550 Cucumis sativus Cucsa.163550 N 0.846
Cucsa.256420 Cucumis sativus Cucsa.256420 N 0.849
Cucsa.313010 Cucumis sativus Cucsa.313010 N 0.860
Eucgr.A02667 Eucalyptus grandis Eucgr.A02667 N 0.914
Eucgr.B00048 Eucalyptus grandis Eucgr.B00048 N 0.846
Eucgr.E00273 Eucalyptus grandis Eucgr.E00273 N 0.849
Eucgr.H03591 Eucalyptus grandis Eucgr.H03591 N 0.876
Eucgr.H04468 Eucalyptus grandis Eucgr.H04468 N 0.846
evm.TU.supercontig_3.51 Carica papaya evm.TU.supercontig_3.51 N 0.883
evm.TU.supercontig_36.191 Carica papaya evm.TU.supercontig_36.191 N 0.846
evm.TU.supercontig_48.15 Carica papaya evm.TU.supercontig_48.15 N 0.846
evm.TU.supercontig_59.132 Carica papaya evm.TU.supercontig_59.132 N 0.849
FAMA Arabidopsis thaliana AT3G24140 N 0.849
fgenesh1_pg.C_scaffold_1002057 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1002057 N 0.846
FMA Vitis vinifera VIT_05s0029g00050 N 0.849
FMA Arabidopsis lyrata scaffold_302925.1 N 0.849
gene02199-v1.0-hybrid Fragaria vesca gene02199-v1.0-hybrid N 0.849
gene06093-v1.0-hybrid Fragaria vesca gene06093-v1.0-hybrid N 0.877
gene12030-v1.0-hybrid Fragaria vesca gene12030-v1.0-hybrid N 0.846
gene22289-v1.0-hybrid Fragaria vesca gene22289-v1.0-hybrid N 0.846
GLYMA01G23230 Glycine max GLYMA01G23230 N 0.849
GLYMA02G14290 Glycine max GLYMA02G14290 N 0.849
GLYMA02G37313 Glycine max GLYMA02G37313 N 0.846
GLYMA03G39990 Glycine max GLYMA03G39990 N 0.846
GLYMA04G10630 Glycine max GLYMA04G10630 N 0.846
GLYMA04G41710 Glycine max GLYMA04G41710 N 0.914
GLYMA06G10470 Glycine max GLYMA06G10470 N 0.846
GLYMA06G13081 Glycine max GLYMA06G13081 N 0.914
GLYMA06G35330 Glycine max GLYMA06G35330 N 0.849
GLYMA08G36590 Glycine max GLYMA08G36590 N 0.849
GLYMA10G29760 Glycine max GLYMA10G29760 N 0.857
GLYMA13G08740 Glycine max GLYMA13G08740 N 0.849
GLYMA13G27880 Glycine max GLYMA13G27880 N 0.852
GLYMA14G35560 Glycine max GLYMA14G35560 N 0.846
GLYMA15G11130 Glycine max GLYMA15G11130 N 0.852
GLYMA19G42520 Glycine max GLYMA19G42520 N 0.846
GLYMA20G37550 Glycine max GLYMA20G37550 N 0.846
Gorai.006G054300 Gossypium raimondii Gorai.006G054300 N 0.876
Gorai.006G217200 Gossypium raimondii Gorai.006G217200 N 0.849
Gorai.008G225800 Gossypium raimondii Gorai.008G225800 N 0.849
Gorai.008G270700 Gossypium raimondii Gorai.008G270700 N 0.914
Gorai.011G159100 Gossypium raimondii Gorai.011G159100 N 0.849
GRMZM2G045109 Zea mays GRMZM2G045109 N 0.902
GRMZM2G064638 Zea mays GRMZM2G064638 N 0.914
GRMZM2G082586 Zea mays GRMZM2G082586 N 0.846
GRMZM2G085751 Zea mays GRMZM2G085751 N 0.914
GRMZM2G417164 Zea mays GRMZM2G417164 N 0.846
GSMUA_Achr10G01060_001 Musa acuminata GSMUA_Achr10G01060_001 N 0.914
GSMUA_Achr10G30300_001 Musa acuminata GSMUA_Achr10G30300_001 N 0.846
GSMUA_Achr5G06780_001 Musa acuminata GSMUA_Achr5G06780_001 N 0.894
GSMUA_Achr7G12790_001 Musa acuminata GSMUA_Achr7G12790_001 N 0.845
GSMUA_Achr7G21110_001 Musa acuminata GSMUA_Achr7G21110_001 N 0.846
GSMUA_Achr7G21190_001 Musa acuminata GSMUA_Achr7G21190_001 N 0.846
GSMUA_Achr8G17650_001 Musa acuminata GSMUA_Achr8G17650_001 N 0.846
GSMUA_Achr8G19870_001 Musa acuminata GSMUA_Achr8G19870_001 N 0.914
LPERR02G09400 Leersia perrieri LPERR02G09400 N 0.914
LPERR05G23890 Leersia perrieri LPERR05G23890 N 0.846
LPERR06G13950 Leersia perrieri LPERR06G13950 N 0.911
Lus10000332.g Linum usitatissimum Lus10000332.g N 0.846
Lus10001066.g Linum usitatissimum Lus10001066.g N 0.864
Lus10007139.g Linum usitatissimum Lus10007139.g N 0.860
Lus10014938.g Linum usitatissimum Lus10014938.g N 0.884
Lus10016680.g Linum usitatissimum Lus10016680.g N 0.849
Lus10029950.g Linum usitatissimum Lus10029950.g N 0.846
Lus10039328.g Linum usitatissimum Lus10039328.g N 0.864
MDP0000131133 Malus domestica MDP0000131133 N 0.894
MDP0000205030 Malus domestica MDP0000205030 N 0.877
MDP0000267178 Malus domestica MDP0000267178 N 0.846
MDP0000318772 Malus domestica MDP0000318772 N 0.877
MDP0000646823 Malus domestica MDP0000646823 N 0.849
MDP0000672131 Malus domestica MDP0000672131 N 0.846
MDP0000944210 Malus domestica MDP0000944210 N 0.846
mgf011108m Mimulus guttatus mgf011108m N 0.903
mgf014552m Mimulus guttatus mgf014552m N 0.914
mgf015694m Mimulus guttatus mgf015694m N 0.849
MLOC_21759 Hordeum vulgare MLOC_21759 N 0.846
MLOC_54435 Hordeum vulgare MLOC_54435 N 0.914
MTR_0194s0050 Medicago truncatula MTR_0194s0050 N 0.849
MTR_1g028470 Medicago truncatula MTR_1g028470 N 0.854
MTR_2g022280 Medicago truncatula MTR_2g022280 N 0.852
MTR_3g090850 Medicago truncatula MTR_3g090850 N 0.914
MTR_3g099620 Medicago truncatula MTR_3g099620 N 0.846
MTR_5g064950 Medicago truncatula MTR_5g064950 N 0.870
MTR_7g113830 Medicago truncatula MTR_7g113830 N 0.846
MTR_8g066770 Medicago truncatula MTR_8g066770 N 0.849
MUTE Arabidopsis lyrata scaffold_300691.1 N 0.876
MUTE Arabidopsis thaliana AT3G06120 N 0.876
MUTE Vitis vinifera VIT_05s0020g02700 N 0.852
OB02G19900 Oryza brachyantha OB02G19900 N 0.914
OB05G35750 Oryza brachyantha OB05G35750 N 0.846
OB09G19960 Oryza brachyantha OB09G19960 N 0.846
OBART02G11110 Oryza barthii OBART02G11110 N 0.914
OBART06G16920 Oryza barthii OBART06G16920 N 0.911
OGLUM02G11060 Oryza glumaepatula OGLUM02G11060 N 0.914
OGLUM06G17990 Oryza glumaepatula OGLUM06G17990 N 0.911
OLONG_015104 Oryza longistaminata OLONG_015104 N 0.911
OMERI02G11850 Oryza meridionalis OMERI02G11850 N 0.914
OMERI06G17780 Oryza meridionalis OMERI06G17780 N 0.911
OMERI09G10430 Oryza meridionalis OMERI09G10430 N 0.846
ONIVA02G12460 Oryza nivara ONIVA02G12460 N 0.914
ONIVA06G19730 Oryza nivara ONIVA06G19730 N 0.911
ONIVA09G13890 Oryza nivara ONIVA09G13890 N 0.846
OPUNC02G09860 Oryza punctata OPUNC02G09860 N 0.914
OPUNC06G15310 Oryza punctata OPUNC06G15310 N 0.911
OPUNC09G11790 Oryza punctata OPUNC09G11790 N 0.846
orange1.1g014477m.g Citrus sinensis orange1.1g014477m.g N 0.849
orange1.1g020210m.g Citrus sinensis orange1.1g020210m.g N 0.846
orange1.1g036531m.g Citrus sinensis orange1.1g036531m.g N 0.846
orange1.1g042904m.g Citrus sinensis orange1.1g042904m.g N 0.911
ORGLA02G0100500 Oryza glaberrima ORGLA02G0100500 N 0.914
ORGLA06G0140300 Oryza glaberrima ORGLA06G0140300 N 0.911
ORGLA09G0101900 Oryza glaberrima ORGLA09G0101900 N 0.846
ORUFI02G11080 Oryza rufipogon ORUFI02G11080 N 0.914
ORUFI06G17910 Oryza rufipogon ORUFI06G17910 N 0.911
ORUFI09G14410 Oryza rufipogon ORUFI09G14410 N 0.846
OS02G0257500 Oryza sativa OS02G0257500 N 0.914
OS06G0526100 Oryza sativa OS06G0526100 N 0.911
OS09G0468700 Oryza sativa OS09G0468700 N 0.846
Pavir.Aa02723 Panicum virgatum Pavir.Aa02723 N 0.914
Pavir.Ab01030 Panicum virgatum Pavir.Ab01030 N 0.914
Pavir.Bb02386 Panicum virgatum Pavir.Bb02386 N 0.846
Pavir.Da00918 Panicum virgatum Pavir.Da00918 N 0.914
Pavir.Db01402 Panicum virgatum Pavir.Db01402 N 0.914
Pavir.Ea00071 Panicum virgatum Pavir.Ea00071 N 0.846
Pavir.J22933 Panicum virgatum Pavir.J22933 N 0.846
PDK_20s1314901g001 Phoenix dactylifera PDK_20s1314901g001 N 0.914
PGSC0003DMG400009101 Solanum tuberosum PGSC0003DMG400009101 N 0.894
PGSC0003DMG400015760 Solanum tuberosum PGSC0003DMG400015760 N 0.849
PGSC0003DMG400017540 Solanum tuberosum PGSC0003DMG400017540 N 0.849
PGSC0003DMG400028578 Solanum tuberosum PGSC0003DMG400028578 N 0.846
PGSC0003DMG400029634 Solanum tuberosum PGSC0003DMG400029634 N 0.849
PK01904.1 Cannabis sativa PK01904.1 N 0.911
PK04856.1 Cannabis sativa PK04856.1 N 0.849
PK14736.1 Cannabis sativa PK14736.1 N 0.846
PK18533.1 Cannabis sativa PK18533.1 N 0.845
PK21294.1 Cannabis sativa PK21294.1 N 0.846
PK28391.1 Cannabis sativa PK28391.1 N 0.849
Pm003380 Prunus mume Pm003380 N 0.846
Pm004489 Prunus mume Pm004489 N 0.846
Pm008014 Prunus mume Pm008014 N 0.877
Pm009474 Prunus mume Pm009474 N 0.849
Pm019784 Prunus mume Pm019784 N 0.894
Pm023207 Prunus mume Pm023207 N 0.849
POPTR_0001s32160 Populus trichocarpa POPTR_0001s32160 N 0.849
POPTR_0002s10230 Populus trichocarpa POPTR_0002s10230 N 0.846
POPTR_0005s04160 Populus trichocarpa POPTR_0005s04160 N 0.846
POPTR_0008s20720 Populus trichocarpa POPTR_0008s20720 N 0.852
POPTR_0012s01370 Populus trichocarpa POPTR_0012s01370 N 0.914
POPTR_0013s02680 Populus trichocarpa POPTR_0013s02680 N 0.846
POPTR_0015s06160 Populus trichocarpa POPTR_0015s06160 N 0.914
POPTR_0017s08160 Populus trichocarpa POPTR_0017s08160 N 0.849
PRUPE_ppa009461mg Prunus persica PRUPE_ppa009461mg N 0.846
PRUPE_ppa011095mg Prunus persica PRUPE_ppa011095mg N 0.846
PRUPE_ppa015055mg Prunus persica PRUPE_ppa015055mg N 0.894
PRUPE_ppa017746mg Prunus persica PRUPE_ppa017746mg N 0.849
PRUPE_ppa019299mg Prunus persica PRUPE_ppa019299mg N 0.877
PRUPE_ppa020429mg Prunus persica PRUPE_ppa020429mg N 0.849
SapurV1A.0022s0230 Salix purpurea SapurV1A.0022s0230 N 0.852
SapurV1A.0092s0130 Salix purpurea SapurV1A.0092s0130 N 0.846
SapurV1A.0377s0010 Salix purpurea SapurV1A.0377s0010 N 0.881
SapurV1A.0462s0070 Salix purpurea SapurV1A.0462s0070 N 0.849
SapurV1A.0613s0120 Salix purpurea SapurV1A.0613s0120 N 0.846
SapurV1A.1043s0040 Salix purpurea SapurV1A.1043s0040 N 0.881
SapurV1A.1055s0160 Salix purpurea SapurV1A.1055s0160 N 0.846
SapurV1A.1124s0170 Salix purpurea SapurV1A.1124s0170 N 0.846
SapurV1A.1227s0030 Salix purpurea SapurV1A.1227s0030 N 0.914
Sb02g027210 Sorghum bicolor Sb02g027210 N 0.846
Sb04g009390 Sorghum bicolor Sb04g009390 N 0.914
Sb09g030930 Sorghum bicolor Sb09g030930 N 0.846
Sb10g020490 Sorghum bicolor Sb10g020490 N 0.914
SELMODRAFT_410402 Selaginella moellendorffii SELMODRAFT_410402 N 0.849
SELMODRAFT_428659 Selaginella moellendorffii SELMODRAFT_428659 N 0.849
SELMODRAFT_430716 Selaginella moellendorffii SELMODRAFT_430716 N 0.849
SELMODRAFT_451148 Selaginella moellendorffii SELMODRAFT_451148 N 0.849
Si004438m.g Setaria italica Si004438m.g N 0.846
Si006640m.g Setaria italica Si006640m.g N 0.914
Si013925m.g Setaria italica Si013925m.g N 0.846
Si017482m.g Setaria italica Si017482m.g N 0.914
Solyc01g080050.2 Solanum lycopersicum Solyc01g080050.2 N 0.849
Solyc03g007410.2 Solanum lycopersicum Solyc03g007410.2 N 0.914
Solyc05g053660.1 Solanum lycopersicum Solyc05g053660.1 N 0.849
Solyc08g076820.2 Solanum lycopersicum Solyc08g076820.2 N 0.849
Solyc09g091760.1 Solanum lycopersicum Solyc09g091760.1 N 0.849
SPCH Arabidopsis thaliana AT5G53210 N 0.914
SPCH Arabidopsis lyrata Al_scaffold_0008_1712 N 0.914
SPCH Vitis vinifera VIT_16s0050g02500 N 0.914
TCM_015345 Theobroma cacao TCM_015345 N 0.914
TCM_015694 Theobroma cacao TCM_015694 N 0.849
TCM_020336 Theobroma cacao TCM_020336 N 0.849
TCM_020520 Theobroma cacao TCM_020520 N 0.852
TCM_026599 Theobroma cacao TCM_026599 N 0.846
TCM_034439 Theobroma cacao TCM_034439 N 0.846
Thhalv10002558m.g Eutrema salsugineum Thhalv10002558m.g N 0.849
Thhalv10009836m.g Eutrema salsugineum Thhalv10009836m.g N 0.846
Thhalv10013877m.g Eutrema salsugineum Thhalv10013877m.g N 0.914
Thhalv10018867m.g Eutrema salsugineum Thhalv10018867m.g N 0.846
Thhalv10022251m.g Eutrema salsugineum Thhalv10022251m.g N 0.876
Traes_5BL_DA72CE20D Triticum aestivum Traes_5BL_DA72CE20D N 0.846
Traes_7DL_1717A9083 Triticum aestivum Traes_7DL_1717A9083 N 0.914
TRIUR3_09788 Triticum urartu TRIUR3_09788 N 0.846
VIT_14s0128g00110 Vitis vinifera VIT_14s0128g00110 N 0.846
VIT_18s0001g06650 Vitis vinifera VIT_18s0001g06650 N 0.846