cassava36544.valid.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava36544.valid.m1 T048061_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN

NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.855 0.863
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava36544.valid.m1 bHLH 344 394

Links

Other bHLH family TFs
Other Manihot esculenta TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_005925 Theobroma cacao TCM_005925 I 0.869
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I 0.869
30152.m002405 Ricinus communis 30152.m002405 I 0.869
Gorai.004G035800 Gossypium raimondii Gorai.004G035800 I 0.869
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I 0.869
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I 0.869
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I 0.869
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I 0.869
29216.m000261 Ricinus communis 29216.m000261 I 0.866
cassava35967.valid.m1 Manihot esculenta cassava35967.valid.m1 I 0.866
cassava30692.valid.m1 Manihot esculenta cassava30692.valid.m1 I 0.866
cassava2126.valid.m1 Manihot esculenta cassava2126.valid.m1 I 0.866
Pm025821 Prunus mume Pm025821 I 0.866
Cla017792 Citrullus lanatus Cla017792 I 0.866
PRUPE_ppa006295mg Prunus persica PRUPE_ppa006295mg I 0.866
POPTR_0016s05100 Populus trichocarpa POPTR_0016s05100 I 0.866
PRUPE_ppa019977mg Prunus persica PRUPE_ppa019977mg I 0.866
Solyc10g079050.1 Solanum lycopersicum Solyc10g079050.1 I 0.866
cassava44054.valid.m1 Manihot esculenta cassava44054.valid.m1 I 0.866
VIT_08s0007g07810 Vitis vinifera VIT_08s0007g07810 I 0.866
Pm000447 Prunus mume Pm000447 I 0.866
e_gw1.34.393.1 Physcomitrella patens e_gw1.34.393.1 I 0.866
MDP0000180376 Malus domestica MDP0000180376 I 0.866
Lus10031826.g Linum usitatissimum Lus10031826.g I 0.866
Lus10031255.g Linum usitatissimum Lus10031255.g I 0.866
orange1.1g018007m.g Citrus sinensis orange1.1g018007m.g I 0.866
SapurV1A.0018s0320 Salix purpurea SapurV1A.0018s0320 I 0.866
PDK_20s1391471g001 Phoenix dactylifera PDK_20s1391471g001 I 0.866
PK18038.1 Cannabis sativa PK18038.1 I 0.866
SapurV1A.0133s0050 Salix purpurea SapurV1A.0133s0050 I 0.866
Lus10021023.g Linum usitatissimum Lus10021023.g I 0.866
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I 0.866
Ciclev10005233m.g Citrus clementina Ciclev10005233m.g I 0.866
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I 0.866
mgf016734m Mimulus guttatus mgf016734m I 0.866
Eucgr.A02417 Eucalyptus grandis Eucgr.A02417 I 0.866
evm.TU.supercontig_84.89 Carica papaya evm.TU.supercontig_84.89 I 0.866
Gorai.002G228900 Gossypium raimondii Gorai.002G228900 I 0.866
gene20622-v1.0-hybrid Fragaria vesca gene20622-v1.0-hybrid I 0.866
gene00545-v1.0-hybrid Fragaria vesca gene00545-v1.0-hybrid I 0.866
Cucsa.242910 Cucumis sativus Cucsa.242910 I 0.866
TCM_024842 Theobroma cacao TCM_024842 I 0.866
GSMUA_Achr5G22310_001 Musa acuminata GSMUA_Achr5G22310_001 I 0.866
PGSC0003DMG400008153 Solanum tuberosum PGSC0003DMG400008153 I 0.866
POPTR_0006s05640 Populus trichocarpa POPTR_0006s05640 I 0.866
GLYMA10G12150 Glycine max GLYMA10G12150 I 0.866
Eucgr.G03396 Eucalyptus grandis Eucgr.G03396 I 0.856
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.856
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.856
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I 0.855
ONIVA08G17500 Oryza nivara ONIVA08G17500 I 0.855
OMERI09G11370 Oryza meridionalis OMERI09G11370 I 0.855
OBART09G14660 Oryza barthii OBART09G14660 I 0.855
OMERI08G16700 Oryza meridionalis OMERI08G16700 I 0.855
OLONG_017566 Oryza longistaminata OLONG_017566 I 0.855
GSMUA_Achr7G20490_001 Musa acuminata GSMUA_Achr7G20490_001 I 0.855
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I 0.855
BGIOSGA031008 Oryza indica BGIOSGA031008 I 0.855
BGIOSGA028963 Oryza indica BGIOSGA028963 I 0.855
F775_24151 Aegilops tauschii F775_24151 I 0.855
ONIVA08G22410 Oryza nivara ONIVA08G22410 I 0.855
OB08G26810 Oryza brachyantha OB08G26810 I 0.855
MLOC_67834 Hordeum vulgare MLOC_67834 I 0.855
OBART08G19860 Oryza barthii OBART08G19860 I 0.855
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I 0.855
TRIUR3_26625 Triticum urartu TRIUR3_26625 I 0.855
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I 0.855
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I 0.855
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I 0.855
OS09G0487900 Oryza sativa OS09G0487900 I 0.855
OS08G0506700 Oryza sativa OS08G0506700 D 0.855
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I 0.855
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I 0.855
OPUNC08G18020 Oryza punctata OPUNC08G18020 I 0.855
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I 0.855
OPUNC09G13060 Oryza punctata OPUNC09G13060 I 0.855
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.854
gw1.185.89.1 Physcomitrella patens gw1.185.89.1 I 0.854
PDK_20s1302565g001 Phoenix dactylifera PDK_20s1302565g001 I 0.853
Solyc12g100140.1 Solanum lycopersicum Solyc12g100140.1 I 0.852
PGSC0003DMG400023852 Solanum tuberosum PGSC0003DMG400023852 I 0.852
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.851
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.851
Solyc11g056650.1 Solanum lycopersicum Solyc11g056650.1 I 0.843
PGSC0003DMG400022058 Solanum tuberosum PGSC0003DMG400022058 I 0.843
orange1.1g016638m.g Citrus sinensis orange1.1g016638m.g I 0.842
gene26967-v1.0-hybrid Fragaria vesca gene26967-v1.0-hybrid I 0.842
Ciclev10031622m.g Citrus clementina Ciclev10031622m.g I 0.842
SapurV1A.0071s0010 Salix purpurea SapurV1A.0071s0010 I 0.840
SapurV1A.0402s0180 Salix purpurea SapurV1A.0402s0180 I 0.840
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.839
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.839
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.839
SapurV1A.0027s0090 Salix purpurea SapurV1A.0027s0090 I 0.839
Si010513m.g Setaria italica Si010513m.g I 0.839
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.839
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.839
evm.TU.contig_45766 Carica papaya evm.TU.contig_45766 I 0.839
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.839
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.839
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.839
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.839
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.839
OBART02G23210 Oryza barthii OBART02G23210 I 0.839
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.839
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.839
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.839
OB02G30670 Oryza brachyantha OB02G30670 I 0.839
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.839
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.839