cassava36709.valid.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava36709.valid.m1 T048062_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OS01G0235700
M09894_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BHLH66_01
0.914 1.000
MYC2
M01699_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8083
0.890 0.896
PK18474.1
M01127_2.00
Cannabis sativa
NRCACGTGCN

NGCACGTGYN
PBM
Lambert et al.(2019)
pTH10273
0.890 0.896
PK18474.1
M01768_2.00
Cannabis sativa
NCACGWK

MWCGTGN
PBM
Weirauch et al.(2014)
pTH9589
0.890 0.896
MYC4
M01707_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8260
0.890 0.875
MYC3
M01712_2.00
Arabidopsis thaliana
MWYGTGNNNN

NNNNCACRWK
PBM
Weirauch et al.(2014)
pTH8854
0.890 0.875
AT2G22750
M06730_2.00
Arabidopsis thaliana
MRYGTKDNHCACGTGNN

NNCACGTGDNHMACRYK
Dap-seq
OMalley et al.(2016)
bHLH18_col_a
0.882 0.625
BHLH13
M01698_2.00
Arabidopsis thaliana
MCACGTGV

BCACGTGK
PBM
Weirauch et al.(2014)
pTH7565
0.879 0.875
UNE10
M01705_2.00
Arabidopsis thaliana
HCACGTGM

KCACGTGD
PBM
Weirauch et al.(2014)
pTH8112
0.843 0.500
PK09702.1
M01124_2.00
Cannabis sativa
GCACGTGV

BCACGTGC
PBM
Lambert et al.(2019)
pTH11374
0.840 0.625
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava36709.valid.m1 bHLH 355 402

Links

Other bHLH family TFs
Other Manihot esculenta TFs

672 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGABI2DRAFT_228126 Agaricus bisporus AGABI2DRAFT_228126 N 0.000
CC1G_07334 Coprinopsis cinerea CC1G_07334 N 0.000
CY34DRAFT_736232 Suillus luteus CY34DRAFT_736232 N 0.000
DICSQDRAFT_60279 Dichomitus squalens DICSQDRAFT_60279 N 0.000
estExt_fgenesh2_pg.C_130019 Heterobasidion annosum estExt_fgenesh2_pg.C_130019 N 0.000
FIBRA_07513 Fibroporia radiculosa FIBRA_07513 N 0.000
FOMPIDRAFT_132509 Fomitopsis pinicola FOMPIDRAFT_132509 N 0.000
GALMADRAFT_243404 Galerina marginata GALMADRAFT_243404 N 0.000
GLOTRDRAFT_65833 Gloeophyllum trabeum GLOTRDRAFT_65833 N 0.000
GYMLUDRAFT_41111 Gymnopus luxurians GYMLUDRAFT_41111 N 0.000
HETIRDRAFT_461359 Heterobasidion irregulare HETIRDRAFT_461359 N 0.000
HYDPIDRAFT_94787 Hydnomerulius pinastri HYDPIDRAFT_94787 N 0.000
JAAARDRAFT_40663 Jaapia argillacea JAAARDRAFT_40663 N 0.000
K443DRAFT_680951 Laccaria amethystina K443DRAFT_680951 N 0.000
LACBIDRAFT_318097 Laccaria bicolor LACBIDRAFT_318097 N 0.000
M404DRAFT_126970 Pisolithus tinctorius M404DRAFT_126970 N 0.000
M407DRAFT_155401 Tulasnella calospora M407DRAFT_155401 N 0.000
M408DRAFT_33395 Serendipita vermifera M408DRAFT_33395 N 0.000
PAXRUDRAFT_150343 Paxillus rubicundulus PAXRUDRAFT_150343 N 0.000
PHLGIDRAFT_111699 Phlebiopsis gigantea PHLGIDRAFT_111699 N 0.000
PILCRDRAFT_539323 Piloderma croceum PILCRDRAFT_539323 N 0.000
PISMIDRAFT_676173 Pisolithus microcarpus PISMIDRAFT_676173 N 0.000
PLEOSDRAFT_1068470 Pleurotus ostreatus PLEOSDRAFT_1068470 N 0.000
SCLCIDRAFT_143714 Scleroderma citrinum SCLCIDRAFT_143714 N 0.000