CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava40529.m1
(
Manihot esculenta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
cassava40529.m1
T048082_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYC2
M01699_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8083
0.847
0.854
PK18474.1
M01127_2.00
Cannabis sativa
NRCACGTGCN
NGCACGTGYN
PBM
Lambert et al.(2019)
pTH10273
0.847
0.854
PK18474.1
M01768_2.00
Cannabis sativa
NCACGWK
MWCGTGN
PBM
Weirauch et al.(2014)
pTH9589
0.847
0.854
MYC4
M01707_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8260
0.847
0.833
MYC3
M01712_2.00
Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK
PBM
Weirauch et al.(2014)
pTH8854
0.847
0.833
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava40529.m1
bHLH
61
108
LNHVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLADAVTYIKELK
Links
Other
bHLH
family TFs
Other
Manihot esculenta
TFs
142 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy