e_gw1.34.393.1 (Physcomitrella patens)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 e_gw1.34.393.1 T048271_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH

DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.858 0.816
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA

TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.858 0.816
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN

NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.857 0.816
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.34.393.1 bHLH 24 72

Links

Other bHLH family TFs
Other Physcomitrella patens TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
gw1.185.89.1 Physcomitrella patens gw1.185.89.1 I 0.877
gene20622-v1.0-hybrid Fragaria vesca gene20622-v1.0-hybrid I 0.869
gene00545-v1.0-hybrid Fragaria vesca gene00545-v1.0-hybrid I 0.869
evm.TU.supercontig_84.89 Carica papaya evm.TU.supercontig_84.89 I 0.869
Eucgr.A02417 Eucalyptus grandis Eucgr.A02417 I 0.869
Gorai.002G228900 Gossypium raimondii Gorai.002G228900 I 0.869
Lus10031826.g Linum usitatissimum Lus10031826.g I 0.869
Lus10031255.g Linum usitatissimum Lus10031255.g I 0.869
Lus10021023.g Linum usitatissimum Lus10021023.g I 0.869
Gorai.006G140200 Gossypium raimondii Gorai.006G140200 I 0.869
Ciclev10005233m.g Citrus clementina Ciclev10005233m.g I 0.869
cassava44054.valid.m1 Manihot esculenta cassava44054.valid.m1 I 0.869
PRUPE_ppa019977mg Prunus persica PRUPE_ppa019977mg I 0.869
POPTR_0006s05640 Populus trichocarpa POPTR_0006s05640 I 0.869
POPTR_0016s05100 Populus trichocarpa POPTR_0016s05100 I 0.869
PRUPE_ppa006295mg Prunus persica PRUPE_ppa006295mg I 0.869
PGSC0003DMG400008153 Solanum tuberosum PGSC0003DMG400008153 I 0.869
Cucsa.242910 Cucumis sativus Cucsa.242910 I 0.869
MDP0000180376 Malus domestica MDP0000180376 I 0.869
Aquca_009_00280 Aquilegia coerulea Aquca_009_00280 I 0.869
mgf016734m Mimulus guttatus mgf016734m I 0.869
Solyc10g079050.1 Solanum lycopersicum Solyc10g079050.1 I 0.869
TCM_024842 Theobroma cacao TCM_024842 I 0.869
Cla017792 Citrullus lanatus Cla017792 I 0.869
cassava30692.valid.m1 Manihot esculenta cassava30692.valid.m1 I 0.869
GLYMA10G12150 Glycine max GLYMA10G12150 I 0.869
PDK_20s1391471g001 Phoenix dactylifera PDK_20s1391471g001 I 0.869
PK18038.1 Cannabis sativa PK18038.1 I 0.869
29216.m000261 Ricinus communis 29216.m000261 I 0.869
Pm025821 Prunus mume Pm025821 I 0.869
Pm000447 Prunus mume Pm000447 I 0.869
cassava35967.valid.m1 Manihot esculenta cassava35967.valid.m1 I 0.869
VIT_08s0007g07810 Vitis vinifera VIT_08s0007g07810 I 0.869
cassava2126.valid.m1 Manihot esculenta cassava2126.valid.m1 I 0.869
GSMUA_Achr5G22310_001 Musa acuminata GSMUA_Achr5G22310_001 I 0.869
orange1.1g018007m.g Citrus sinensis orange1.1g018007m.g I 0.869
SapurV1A.0133s0050 Salix purpurea SapurV1A.0133s0050 I 0.869
SapurV1A.0018s0320 Salix purpurea SapurV1A.0018s0320 I 0.869
cassava36544.valid.m1 Manihot esculenta cassava36544.valid.m1 I 0.866
Gorai.004G035800 Gossypium raimondii Gorai.004G035800 I 0.866
PGSC0003DMG400025263 Solanum tuberosum PGSC0003DMG400025263 I 0.866
cassava29651.valid.m1 Manihot esculenta cassava29651.valid.m1 I 0.866
30152.m002405 Ricinus communis 30152.m002405 I 0.866
VIT_13s0064g01290 Vitis vinifera VIT_13s0064g01290 I 0.866
POPTR_0009s06910 Populus trichocarpa POPTR_0009s06910 I 0.866
Solyc01g086870.2 Solanum lycopersicum Solyc01g086870.2 I 0.866
TCM_005925 Theobroma cacao TCM_005925 I 0.866
cassava13743.valid.m1 Manihot esculenta cassava13743.valid.m1 I 0.858
Solyc06g065040.2 Solanum lycopersicum Solyc06g065040.2 I 0.858
VIT_18s0041g00690 Vitis vinifera VIT_18s0041g00690 I 0.858
PRUPE_ppa011017mg Prunus persica PRUPE_ppa011017mg I 0.858
TCM_036484 Theobroma cacao TCM_036484 I 0.858
scaffold_103992.1 Arabidopsis lyrata scaffold_103992.1 I 0.858
Cucsa.061590 Cucumis sativus Cucsa.061590 I 0.858
Pm004181 Prunus mume Pm004181 I 0.858
Cagra.9781s0002 Capsella grandiflora Cagra.9781s0002 I 0.858
Thhalv10028883m.g Eutrema salsugineum Thhalv10028883m.g I 0.858
Bra036760 Brassica rapa Bra036760 I 0.858
SapurV1A.1647s0020 Salix purpurea SapurV1A.1647s0020 I 0.858
fgenesh2_kg.6__2924__AT4G09180.1 Arabidopsis lyrata fgenesh2_kg.6__2924__AT4G09180.1 I 0.858
SapurV1A.0690s0120 Salix purpurea SapurV1A.0690s0120 I 0.858
Bra028088 Brassica rapa Bra028088 I 0.858
Bo8g026850 Brassica oleracea Bo8g026850 I 0.858
BHLH80 Arabidopsis thaliana AT1G35460 D 0.858
BHLH81 Arabidopsis thaliana AT4G09180 I 0.858
PK06301.1 Cannabis sativa PK06301.1 I 0.858
Bo6g043840 Brassica oleracea Bo6g043840 I 0.858
GLYMA08G26110 Glycine max GLYMA08G26110 I 0.858
SapurV1A.0391s0050 Salix purpurea SapurV1A.0391s0050 I 0.858
Cagra.18223s0002 Capsella grandiflora Cagra.18223s0002 I 0.858
Carubv10001721m.g Capsella rubella Carubv10001721m.g I 0.858
Bostr.25463s0393 Boechera stricta Bostr.25463s0393 I 0.858
Bostr.1774s0027 Boechera stricta Bostr.1774s0027 I 0.858
mgf002701m Mimulus guttatus mgf002701m I 0.858
Carubv10010050m.g Capsella rubella Carubv10010050m.g I 0.858
Ciclev10002083m.g Citrus clementina Ciclev10002083m.g I 0.858
orange1.1g023215m.g Citrus sinensis orange1.1g023215m.g I 0.858
MDP0000269890 Malus domestica MDP0000269890 I 0.858
Gorai.013G138300 Gossypium raimondii Gorai.013G138300 I 0.858
gene26880-v1.0-hybrid Fragaria vesca gene26880-v1.0-hybrid I 0.858
PGSC0003DMG400031314 Solanum tuberosum PGSC0003DMG400031314 I 0.858
Traes_7DS_B671A4EAD Triticum aestivum Traes_7DS_B671A4EAD I 0.857
OGLUM09G15300 Oryza glumaepatula OGLUM09G15300 I 0.857
OGLUM08G21000 Oryza glumaepatula OGLUM08G21000 I 0.857
OBART09G14660 Oryza barthii OBART09G14660 I 0.857
TRIUR3_26625 Triticum urartu TRIUR3_26625 I 0.857
OMERI08G16700 Oryza meridionalis OMERI08G16700 I 0.857
ONIVA08G17500 Oryza nivara ONIVA08G17500 I 0.857
OMERI09G11370 Oryza meridionalis OMERI09G11370 I 0.857
OBART08G19860 Oryza barthii OBART08G19860 I 0.857
OB08G26810 Oryza brachyantha OB08G26810 I 0.857
BGIOSGA031008 Oryza indica BGIOSGA031008 I 0.857
BGIOSGA028963 Oryza indica BGIOSGA028963 I 0.857
BRADI3G39927 Brachypodium distachyon BRADI3G39927 I 0.857
F775_24151 Aegilops tauschii F775_24151 I 0.857
MLOC_67834 Hordeum vulgare MLOC_67834 I 0.857
GSMUA_Achr7G20490_001 Musa acuminata GSMUA_Achr7G20490_001 I 0.857
ONIVA08G22410 Oryza nivara ONIVA08G22410 I 0.857
OLONG_017566 Oryza longistaminata OLONG_017566 I 0.857
ORUFI08G22260 Oryza rufipogon ORUFI08G22260 I 0.857
ORGLA09G0112900 Oryza glaberrima ORGLA09G0112900 I 0.857
ORUFI09G15820 Oryza rufipogon ORUFI09G15820 I 0.857
OS09G0487900 Oryza sativa OS09G0487900 I 0.857
Traes_7AS_4FAB72487 Triticum aestivum Traes_7AS_4FAB72487 I 0.857
ORGLA08G0174800 Oryza glaberrima ORGLA08G0174800 I 0.857
OS08G0506700 Oryza sativa OS08G0506700 D 0.857
OPUNC09G13060 Oryza punctata OPUNC09G13060 I 0.857
OPUNC08G18020 Oryza punctata OPUNC08G18020 I 0.857
evm.TU.supercontig_85.115 Carica papaya evm.TU.supercontig_85.115 I 0.856
Eucgr.G03396 Eucalyptus grandis Eucgr.G03396 I 0.854
PDK_20s1484071g001 Phoenix dactylifera PDK_20s1484071g001 I 0.854
SapurV1A.0111s0030 Salix purpurea SapurV1A.0111s0030 I 0.854
SapurV1A.1898s0040 Salix purpurea SapurV1A.1898s0040 I 0.854
PDK_20s1630671g001 Phoenix dactylifera PDK_20s1630671g001 I 0.854
AMTR_s00070p00149100 Amborella trichopoda AMTR_s00070p00149100 I 0.847
GLYMA19G32600 Glycine max GLYMA19G32600 I 0.842
Sb04g025260 Sorghum bicolor Sb04g025260 I 0.841
Pavir.J08536 Panicum virgatum Pavir.J08536 I 0.841
BGIOSGA008576 Oryza indica BGIOSGA008576 I 0.841
Si010513m.g Setaria italica Si010513m.g I 0.841
Sb06g020810 Sorghum bicolor Sb06g020810 I 0.841
Pavir.Gb01377 Panicum virgatum Pavir.Gb01377 I 0.841
GRMZM2G437481 Zea mays GRMZM2G437481 I 0.841
LPERR02G18900 Leersia perrieri LPERR02G18900 I 0.841
ONIVA02G26110 Oryza nivara ONIVA02G26110 I 0.841
ORUFI02G24640 Oryza rufipogon ORUFI02G24640 I 0.841
OLONG_009256 Oryza longistaminata OLONG_009256 I 0.841
OMERI02G22740 Oryza meridionalis OMERI02G22740 I 0.841
OBART02G23210 Oryza barthii OBART02G23210 I 0.841
OB02G30670 Oryza brachyantha OB02G30670 I 0.841
Pavir.Ab02229 Panicum virgatum Pavir.Ab02229 I 0.841
ORGLA02G0200100 Oryza glaberrima ORGLA02G0200100 I 0.841
OPUNC02G21170 Oryza punctata OPUNC02G21170 I 0.841
Pavir.Ga01365 Panicum virgatum Pavir.Ga01365 I 0.841
orange1.1g016638m.g Citrus sinensis orange1.1g016638m.g I 0.840
Ciclev10031622m.g Citrus clementina Ciclev10031622m.g I 0.840
gene26967-v1.0-hybrid Fragaria vesca gene26967-v1.0-hybrid I 0.840
GLYMA02G29830 Glycine max GLYMA02G29830 I 0.839