e_gw.492.5.1 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 e_gw.492.5.1 T048292_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Mitf
M01741_2.00
Mus musculus
NCDCGTGAYN

NRTCACGHGN
PBM
Weirauch et al.(2014)
pTH5465
0.845 0.906
MITF
M08058_2.00
Homo sapiens
NNNDRTCACGTGAYHNNN

NNNDRTCACGTGAYHNNN
ChIP-seq
Mathelier et al.(2014)
MA0620.2
0.845 0.906
MITF
M08740_2.00
Homo sapiens
YCAYGTGACH

DGTCACRTGR
Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A
0.845 0.906
Mitf
M08765_2.00
Mus musculus
BCHYGTGACY

RGTCACRDGV
Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A
0.845 0.906
Mitf
M09475_2.00
Mus musculus
GTCACRWGVB

VBCWYGTGAC
Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085
0.845 0.906
MITF
M09880_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MITF_Q4
0.845 0.906
MITF
M09881_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MITF_Q6
0.845 0.906
Tfe3
M01715_2.00
Mus musculus
NCDCRTGAYN

NRTCAYGHGN
PBM
Weirauch et al.(2014)
pTH5057
0.845 0.887
TFE3
M02773_2.00
Homo sapiens
VNCACGTGMY

RKCACGTGNB
SELEX
Jolma et al.(2013)
TFE3_1
0.845 0.887
TFE3
M04058_2.00
Homo sapiens
YVCACGTGAYN

NRTCACGTGBR
SELEX
Yin et al.(2017)
TFE3_eDBD_HT-SELEX
0.845 0.887
Tfe3
M05833_2.00
Mus musculus
CACGTGAY

RTCACGTG
SMiLE-seq
Isakova et al.(2017)
TFE3
0.845 0.887
TFE3
M08709_2.00
Homo sapiens
TCACGTGACH

DGTCACGTGA
Misc
Kulakovskiy et al.(2013)
TFE3_HUMAN.H11MO.0.B
0.845 0.887
Tfe3
M08743_2.00
Mus musculus
TCACGTGACH

DGTCACGTGA
Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A
0.845 0.887
Tfe3
M09884_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFEA_01
0.845 0.887
TFE3
M09790_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFEA_Q6
0.845 0.887
TFE3
M04059_2.00
Homo sapiens
NRTCACATGBB

VVCATGTGAYN
SELEX
Yin et al.(2017)
TFE3_eDBD_Methyl-HT-SELEX
0.845 0.887
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.492.5.1 bHLH 235 288

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

Invalid Input OrderBy

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action