e_gw.59.47.1 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 e_gw.59.47.1 T048293_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ASCL1
M04135_2.00
Homo sapiens
NRCASSTGYN

NRCASSTGYN
SELEX
Yin et al.(2017)
ASCL1_eDBD_HT-SELEX
0.842 0.820
ASCL1
M08055_2.00
Homo sapiens
NNRGCAGCTGSNN

NNSCAGCTGCYNN
ChIP-seq
Mathelier et al.(2014)
MA1100.1
0.842 0.820
ASCL1
M08730_2.00
Homo sapiens
NNVCASCTGCYBYN

NRVRGCAGSTGBNN
Misc
Kulakovskiy et al.(2013)
ASCL1_HUMAN.H11MO.0.A
0.842 0.820
Ascl1
M08748_2.00
Mus musculus
BHSCASCTGCYBBN

NVVRGCAGSTGSDV
Misc
Kulakovskiy et al.(2013)
ASCL1_MOUSE.H11MO.0.A
0.842 0.820
Ascl1
M09464_2.00
Mus musculus
NVCABCTGBBNN

NNVVCAGVTGBN
Misc
Heinz et al.(2010)
NeuralTubes-Ascl1_GSE55840
0.842 0.820
ASCL1
M09855_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MASH1_Q6_01
0.842 0.820
ASCL1
M09856_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MASH1_Q6_02
0.842 0.820
ASCL1
M09857_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MASH1_Q6
0.842 0.820
ASCL1
M04136_2.00
Homo sapiens
NRCAGCTGYN

NRCAGCTGYN
SELEX
Yin et al.(2017)
ASCL1_eDBD_Methyl-HT-SELEX
0.842 0.820
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw.59.47.1 bHLH 68 118

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
e_gw.302.11.1 Branchiostoma floridae e_gw.302.11.1 I 0.914
ascl1a Danio rerio ENSDARG00000038386 I 0.862
ENSGMOG00000002268 Gadus morhua ENSGMOG00000002268 I 0.862
ENSONIG00000021219 Oreochromis niloticus ENSONIG00000021219 I 0.862
ENSXMAG00000019614 Xiphophorus maculatus ENSXMAG00000019614 I 0.862
ascl1a Gasterosteus aculeatus ENSGACG00000020048 I 0.862
ENSPFOG00000018073 Poecilia formosa ENSPFOG00000018073 I 0.862
ascl1a Takifugu rubripes ENSTRUG00000012801 I 0.862
ascl1a Oryzias latipes ENSORLG00000016504 I 0.862
Ascl1 Rattus norvegicus ENSRNOG00000004294 I 0.842
ENSPPYG00000004884 Pongo abelii ENSPPYG00000004884 I 0.842
ASCL1 Pteropus vampyrus ENSPVAG00000011272 I 0.842
ASCL1 Tursiops truncatus ENSTTRG00000016243 I 0.842
ENSSHAG00000011936 Sarcophilus harrisii ENSSHAG00000011936 I 0.842
ENSSTOG00000028420 Ictidomys tridecemlineatus ENSSTOG00000028420 I 0.842
SMAR011494 Strigamia maritima SMAR011494 I 0.842
ascl1 Xenopus tropicalis XB-GENE-1032967 I 0.842
ascl1.L Xenopus laevis XB-GENE-1032969 I 0.842
ascl1.S Xenopus laevis XB-GENE-17340658 I 0.842
Pvit_15764 Pogona vitticeps Pvit_15764 I 0.842
Ogr07565 Ophisaurus gracilis Ogr07565 I 0.842
ENSBTAP00000021592-D1 Bos grunniens ENSBTAP00000021592-D1 I 0.842
ENSP00000266744 Macaca fascicularis ENSP00000266744 I 0.842
ASCL1 Vicugna pacos ENSVPAG00000002018 I 0.842
ASCL1 Otolemur garnettii ENSOGAG00000030324 I 0.842
ASCL1 Homo sapiens ENSG00000139352 D 0.842
ASCL1 Bos taurus ENSBTAG00000016227 I 0.842
ASCL1 Gorilla gorilla ENSGGOG00000005479 I 0.842
ENSAMEG00000006449 Ailuropoda melanoleuca ENSAMEG00000006449 I 0.842
ASCL1 Felis catus ENSFCAG00000008250 I 0.842
ASCL1 Dasypus novemcinctus ENSDNOG00000001616 I 0.842
ASCL1 Canis familiaris ENSCAFG00000007324 I 0.842
ASCL1 Cavia porcellus ENSCPOG00000020666 I 0.842
ENSCSAG00000018938 Chlorocebus sabaeus ENSCSAG00000018938 I 0.842
ENSLACG00000001911 Latimeria chalumnae ENSLACG00000001911 I 0.842
ENSLACG00000010712 Latimeria chalumnae ENSLACG00000010712 I 0.842
ASCL1 Ornithorhynchus anatinus ENSOANG00000013973 I 0.842
ENSOARG00000015879 Ovis aries ENSOARG00000015879 I 0.842
ASCL1 Oryctolagus cuniculus ENSOCUG00000006992 I 0.842
ENSNLEG00000006410 Nomascus leucogenys ENSNLEG00000006410 I 0.842
Ascl1 Mus musculus ENSMUSG00000020052 D 0.842
ENSMEUG00000010370 Macropus eugenii ENSMEUG00000010370 I 0.842
ASCL1 Macaca mulatta ENSMMUG00000005747 I 0.842
ASCL1 Monodelphis domestica ENSMODG00000002347 I 0.842
ASCL1 Callithrix jacchus ENSCJAG00000014345 I 0.842
ISCW009120 Ixodes scapularis ISCW009120 N 0.840
SPU_028148 Strongylocentrotus purpuratus SPU_028148 I 0.840
Sakowv30008499m.g Saccoglossus kowalevskii Sakowv30008499m.g I 0.840