CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_2130035
(
Physcomitrella patens
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
estExt_fgenesh1_pg.C_2130035
T048330_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_2130035
bHLH
391
440
THPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQ
Links
Other
bHLH
family TFs
Other
Physcomitrella patens
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.83.237.1
Physcomitrella patens
e_gw1.83.237.1
I
0.884
MTR_4g065870
Medicago truncatula
MTR_4g065870
I
0.863
Bo4g015860
Brassica oleracea
Bo4g015860
I
0.863
Cucsa.143260
Cucumis sativus
Cucsa.143260
I
0.863
Cla006394
Citrullus lanatus
Cla006394
I
0.863
MTR_1g052470
Medicago truncatula
MTR_1g052470
I
0.863
mgf016092m
Mimulus guttatus
mgf016092m
I
0.863
Ca_18899
Cicer arietinum
Ca_18899
I
0.863
Bra004678
Brassica rapa
Bra004678
I
0.863
Pavir.J25484
Panicum virgatum
Pavir.J25484
I
0.851
Pavir.Bb03157
Panicum virgatum
Pavir.Bb03157
I
0.851
Pavir.Ba00676
Panicum virgatum
Pavir.Ba00676
I
0.851
Pavir.Fa00493
Panicum virgatum
Pavir.Fa00493
I
0.851
Si013950m.g
Setaria italica
Si013950m.g
I
0.851
GRMZM2G153454
Zea mays
GRMZM2G153454
I
0.851
GRMZM2G142932
Zea mays
GRMZM2G142932
I
0.851
BRADI4G33670
Brachypodium distachyon
BRADI4G33670
I
0.851
GRMZM5G879527
Zea mays
GRMZM5G879527
N
0.851
MLOC_30102
Hordeum vulgare
MLOC_30102
I
0.851
Si030166m.g
Setaria italica
Si030166m.g
I
0.851
Sb07g027810
Sorghum bicolor
Sb07g027810
I
0.851
Traes_5BL_4317E525B
Triticum aestivum
Traes_5BL_4317E525B
I
0.851