estExt_fgenesh2_pg.C_2400032 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_fgenesh2_pg.C_2400032 T048394_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
dimm
M03613_2.00
Drosophila melanogaster
BDCCATATGGHV

BDCCATATGGHV
SELEX
Nitta et al.(2015)
dimm_1
0.862 0.827
dimm
M03614_2.00
Drosophila melanogaster
BACCATATGGTV

BACCATATGGTV
SELEX
Nitta et al.(2015)
dimm_2
0.862 0.827
dimm
M05976_2.00
Drosophila melanogaster
HCCATATGGYG

CRCCATATGGD
B1H
Zhu et al.(2011)
dimm_da_SANGER_5_FBgn0023091
0.862 0.827
Bhlha15
M01749_2.00
Mus musculus
RCATATGS

SCATATGY
PBM
Weirauch et al.(2014)
pTH4582
0.847 0.808
BHLHA15
M02803_2.00
Homo sapiens
AMCATATGKH

DMCATATGKT
SELEX
Jolma et al.(2013)
BHLHA15_1
0.847 0.808
BHLHA15
M04195_2.00
Homo sapiens
VVCAGCTGBN

NVCAGCTGBB
SELEX
Yin et al.(2017)
BHLHA15_eDBD_HT-SELEX_1
0.847 0.808
BHLHA15
M04196_2.00
Homo sapiens
NVCATATGBN

NVCATATGBN
SELEX
Yin et al.(2017)
BHLHA15_eDBD_HT-SELEX_2
0.847 0.808
BHLHA15
M08739_2.00
Homo sapiens
VVRRCAGCTGK

MCAGCTGYYBB
Misc
Kulakovskiy et al.(2013)
BHA15_HUMAN.H11MO.0.B
0.847 0.808
Bhlha15
M08774_2.00
Mus musculus
VVRRCAGCTGK

MCAGCTGYYBB
Misc
Kulakovskiy et al.(2013)
BHA15_MOUSE.H11MO.0.A
0.847 0.808
BHLHA15
M04197_2.00
Homo sapiens
VVCAGCTGKB

VMCAGCTGBB
SELEX
Yin et al.(2017)
BHLHA15_eDBD_Methyl-HT-SELEX_1
0.847 0.808
BHLHA15
M04198_2.00
Homo sapiens
DVCATATGBH

DVCATATGBH
SELEX
Yin et al.(2017)
BHLHA15_eDBD_Methyl-HT-SELEX_2
0.847 0.808
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_2400032 bHLH 109 161

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

Invalid Input OrderBy

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action