CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_2400032
(
Branchiostoma floridae
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
estExt_fgenesh2_pg.C_2400032
T048394_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dimm
M03613_2.00
Drosophila melanogaster
BDCCATATGGHV
BDCCATATGGHV
SELEX
Nitta et al.(2015)
dimm_1
0.862
0.827
dimm
M03614_2.00
Drosophila melanogaster
BACCATATGGTV
BACCATATGGTV
SELEX
Nitta et al.(2015)
dimm_2
0.862
0.827
dimm
M05976_2.00
Drosophila melanogaster
HCCATATGGYG
CRCCATATGGD
B1H
Zhu et al.(2011)
dimm_da_SANGER_5_FBgn0023091
0.862
0.827
Bhlha15
M01749_2.00
Mus musculus
RCATATGS
SCATATGY
PBM
Weirauch et al.(2014)
pTH4582
0.847
0.808
BHLHA15
M02803_2.00
Homo sapiens
AMCATATGKH
DMCATATGKT
SELEX
Jolma et al.(2013)
BHLHA15_1
0.847
0.808
BHLHA15
M04195_2.00
Homo sapiens
VVCAGCTGBN
NVCAGCTGBB
SELEX
Yin et al.(2017)
BHLHA15_eDBD_HT-SELEX_1
0.847
0.808
BHLHA15
M04196_2.00
Homo sapiens
NVCATATGBN
NVCATATGBN
SELEX
Yin et al.(2017)
BHLHA15_eDBD_HT-SELEX_2
0.847
0.808
BHLHA15
M08739_2.00
Homo sapiens
VVRRCAGCTGK
MCAGCTGYYBB
Misc
Kulakovskiy et al.(2013)
BHA15_HUMAN.H11MO.0.B
0.847
0.808
Bhlha15
M08774_2.00
Mus musculus
VVRRCAGCTGK
MCAGCTGYYBB
Misc
Kulakovskiy et al.(2013)
BHA15_MOUSE.H11MO.0.A
0.847
0.808
BHLHA15
M04197_2.00
Homo sapiens
VVCAGCTGKB
VMCAGCTGBB
SELEX
Yin et al.(2017)
BHLHA15_eDBD_Methyl-HT-SELEX_1
0.847
0.808
BHLHA15
M04198_2.00
Homo sapiens
DVCATATGBH
DVCATATGBH
SELEX
Yin et al.(2017)
BHLHA15_eDBD_Methyl-HT-SELEX_2
0.847
0.808
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_2400032
bHLH
109
161
RRLESNERERMRMHSLNDAFQGLRDVIPHVNADRKLSKIETLTLAQNYIVALT
Links
Other
bHLH
family TFs
Other
Branchiostoma floridae
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy