estExt_fgenesh2_pg.C_90049 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_fgenesh2_pg.C_90049 T048413_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NEUROG2
M02799_2.00
Homo sapiens
RMCATATGBY

RVCATATGKY
SELEX
Jolma et al.(2013)
NEUROG2_1
0.842 0.865
NEUROG2
M02800_2.00
Homo sapiens
RMCATATGBY

RVCATATGKY
SELEX
Jolma et al.(2013)
NEUROG2_2
0.842 0.865
NEUROG2
M04179_2.00
Homo sapiens
RVCATATGBY

RVCATATGBY
SELEX
Yin et al.(2017)
NEUROG2_eDBD_HT-SELEX
0.842 0.865
NEUROG2
M04181_2.00
Homo sapiens
RVCATRTGBY

RVCAYATGBY
SELEX
Yin et al.(2017)
NEUROG2_FL_HT-SELEX
0.842 0.865
Neurog2
M08758_2.00
Mus musculus
VBRRCAGATGGB

VCCATCTGYYVB
Misc
Kulakovskiy et al.(2013)
NGN2_MOUSE.H11MO.0.C
0.842 0.865
NEUROG2
M09879_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NGN2_Q3
0.842 0.865
NEUROG2
M04180_2.00
Homo sapiens
RVCATATGBY

RVCATATGBY
SELEX
Yin et al.(2017)
NEUROG2_eDBD_Methyl-HT-SELEX
0.842 0.865
NEUROG2
M04182_2.00
Homo sapiens
RMCRTRTGYY

RRCAYAYGKY
SELEX
Yin et al.(2017)
NEUROG2_FL_Methyl-HT-SELEX
0.842 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_90049 bHLH 124 176

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
estExt_fgenesh2_kg.C_7600001 Branchiostoma floridae estExt_fgenesh2_kg.C_7600001 I 0.914
ISCW020498 Ixodes scapularis ISCW020498 I 0.914
Ogr17531 Ophisaurus gracilis Ogr17531 I 0.894
neurog3 Danio rerio ENSDARG00000016951 I 0.894
Pvit_01880 Pogona vitticeps Pvit_01880 I 0.894
neurog3.S Xenopus laevis XB-GENE-6055069 I 0.894
XP_002935814 Xenopus tropicalis XP_002935814 I 0.894
neurog3 Xenopus tropicalis XB-GENE-876279 I 0.894
NEUROG1 Anolis carolinensis ENSACAG00000001255 I 0.894
ENSAMXG00000024953 Astyanax mexicanus ENSAMXG00000024953 N 0.884
NEUROG1 Ornithorhynchus anatinus ENSOANG00000003865 I 0.883
NEUROG3 Oryctolagus cuniculus ENSOCUG00000027045 I 0.870
NEUROG3 Otolemur garnettii ENSOGAG00000005928 I 0.870
ENSOARG00000005615 Ovis aries ENSOARG00000005615 I 0.870
ENSPANG00000003722 Papio anubis ENSPANG00000003722 I 0.870
ENSPPYG00000002380 Pongo abelii ENSPPYG00000002380 I 0.870
NEUROG3 Myotis lucifugus ENSMLUG00000024120 I 0.870
ENSMEUG00000016604 Macropus eugenii ENSMEUG00000016604 I 0.870
ENSPSIG00000001125 Pelodiscus sinensis ENSPSIG00000001125 I 0.870
NEUROG3 Macaca mulatta ENSMMUG00000008956 I 0.870
NEUROG3 Monodelphis domestica ENSMODG00000012228 I 0.870
ENSMPUG00000019699 Mustela putorius furo ENSMPUG00000019699 I 0.870
ENSTSYG00000006329 Tarsius syrichta ENSTSYG00000006329 I 0.870
ENSP00000242462-D1 Bos grunniens ENSP00000242462-D1 I 0.870
ENSP00000242462 Macaca fascicularis ENSP00000242462 I 0.870
Ogr11668 Ophisaurus gracilis Ogr11668 I 0.870
Pvit_00533 Pogona vitticeps Pvit_00533 I 0.870
Cmyd_10012142 Chelonia mydas Cmyd_10012142 I 0.870
NEUROG3 Tursiops truncatus ENSTTRG00000008216 I 0.870
Neurog3 Rattus norvegicus ENSRNOG00000024413 I 0.870
ENSSHAG00000002586 Sarcophilus harrisii ENSSHAG00000002586 I 0.870
ENSSTOG00000026959 Ictidomys tridecemlineatus ENSSTOG00000026959 I 0.870
ENSLOCG00000011531 Lepisosteus oculatus ENSLOCG00000011531 I 0.870
NEUROG3 Pan troglodytes ENSPTRG00000002576 I 0.870
Neurog3 Mus musculus ENSMUSG00000044312 I 0.870
NEUROG3 Callithrix jacchus ENSCJAG00000016485 I 0.870
ENSCPOG00000004662 Cavia porcellus ENSCPOG00000004662 I 0.870
ENSCSAG00000018431 Chlorocebus sabaeus ENSCSAG00000018431 I 0.870
NEUROG3 Gorilla gorilla ENSGGOG00000002752 I 0.870
NEUROG3 Homo sapiens ENSG00000122859 I 0.870
NEUROG3 Choloepus hoffmanni ENSCHOG00000004116 I 0.870
NEUROG3 Loxodonta africana ENSLAFG00000028187 I 0.870
ENSAMEG00000019033 Ailuropoda melanoleuca ENSAMEG00000019033 I 0.870
NEUROG3 Bos taurus ENSBTAG00000006431 I 0.870
ENSLACG00000010446 Latimeria chalumnae ENSLACG00000010446 I 0.870
NEUROG3 Canis familiaris ENSCAFG00000023597 I 0.870
ENSLACG00000002633 Latimeria chalumnae ENSLACG00000002633 I 0.866
ENSONIG00000021289 Oreochromis niloticus ENSONIG00000021289 N 0.864
neurog1 Oryzias latipes ENSORLG00000020531 N 0.864
SPU_007147 Strongylocentrotus purpuratus SPU_007147 N 0.864
neurog1 Takifugu rubripes ENSTRUG00000000532 N 0.864
ENSLOCG00000011560 Lepisosteus oculatus ENSLOCG00000011560 N 0.864
ENSPFOG00000019983 Poecilia formosa ENSPFOG00000019983 N 0.864
neurog1 Danio rerio ENSDARG00000056130 N 0.864
ENSGMOG00000005169 Gadus morhua ENSGMOG00000005169 N 0.864
ENSLACG00000010664 Latimeria chalumnae ENSLACG00000010664 I 0.864
NEUROG2 Anolis carolinensis ENSACAG00000023148 N 0.859
ENSMEUG00000001133 Macropus eugenii ENSMEUG00000001133 I 0.859
ENSMODG00000014458 Monodelphis domestica ENSMODG00000014458 I 0.859
ACYPI37104 Acyrthosiphon pisum ACYPI37104 N 0.859
Aan_R011089 Calypte anna Aan_R011089 N 0.847
ENSTGUG00000001245 Taeniopygia guttata ENSTGUG00000001245 N 0.847
ENSCSAVG00000003501 Ciona savignyi ENSCSAVG00000003501 N 0.847
CapteG70345 Capitella teleta CapteG70345 N 0.847
neurogenin Ciona intestinalis ENSCING00000004039 N 0.847
ENSPMAG00000006182 Petromyzon marinus ENSPMAG00000006182 I 0.846
Aan_R002107 Calypte anna Aan_R002107 I 0.842
Cmyd_10017645 Chelonia mydas Cmyd_10017645 I 0.842
ENSP00000317333-D1 Bos grunniens ENSP00000317333-D1 I 0.842
NEUROG2 Bos taurus ENSBTAG00000015259 I 0.842
neurog1 Xenopus tropicalis XB-GENE-491452 N 0.842
ENSAMEG00000015618 Ailuropoda melanoleuca ENSAMEG00000015618 I 0.842
NEUROG2 Macaca mulatta ENSMMUG00000014078 I 0.842
NEUROG2 Canis familiaris ENSCAFG00000025325 I 0.842
NEUROG2 Choloepus hoffmanni ENSCHOG00000000513 I 0.842
NEUROG2 Callithrix jacchus ENSCJAG00000003772 I 0.842
NEUROG2 Monodelphis domestica ENSMODG00000005712 I 0.842
Neurog2 Mus musculus ENSMUSG00000027967 D 0.842
NEUROG2 Gorilla gorilla ENSGGOG00000017054 I 0.842
NEUROG3 Echinops telfairi ENSETEG00000015577 I 0.842
ENSPPYG00000015008 Pongo abelii ENSPPYG00000015008 I 0.842
ENSPANG00000004407 Papio anubis ENSPANG00000004407 I 0.842
NEUROG2 Felis catus ENSFCAG00000010711 I 0.842
NEUROG2 Otolemur garnettii ENSOGAG00000029479 I 0.842
NEUROG2 Oryctolagus cuniculus ENSOCUG00000007063 I 0.842
ENSOARG00000000293 Ovis aries ENSOARG00000000293 I 0.842
NEUROG2 Dasypus novemcinctus ENSDNOG00000010840 I 0.842
ENSNLEG00000016424 Nomascus leucogenys ENSNLEG00000016424 I 0.842
ENSCSAG00000000399 Chlorocebus sabaeus ENSCSAG00000000399 I 0.842
NEUROG2 Homo sapiens ENSG00000178403 D 0.842
ENSTSYG00000001849 Tarsius syrichta ENSTSYG00000001849 I 0.842
ENSSTOG00000011758 Ictidomys tridecemlineatus ENSSTOG00000011758 I 0.842
ENSSHAG00000006703 Sarcophilus harrisii ENSSHAG00000006703 I 0.842
NEUROG2 Pan troglodytes ENSPTRG00000016376 I 0.842
Neurog2 Rattus norvegicus ENSRNOG00000010972 I 0.842
ENSMPUG00000019178 Mustela putorius furo ENSMPUG00000019178 I 0.842