estExt_fgenesh2_pg.C_90049 (Branchiostoma floridae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 estExt_fgenesh2_pg.C_90049 T048413_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NEUROG2
M02799_2.00
Homo sapiens
RMCATATGBY

RVCATATGKY
SELEX
Jolma et al.(2013)
NEUROG2_1
0.842 0.865
NEUROG2
M02800_2.00
Homo sapiens
RMCATATGBY

RVCATATGKY
SELEX
Jolma et al.(2013)
NEUROG2_2
0.842 0.865
NEUROG2
M04179_2.00
Homo sapiens
RVCATATGBY

RVCATATGBY
SELEX
Yin et al.(2017)
NEUROG2_eDBD_HT-SELEX
0.842 0.865
NEUROG2
M04181_2.00
Homo sapiens
RVCATRTGBY

RVCAYATGBY
SELEX
Yin et al.(2017)
NEUROG2_FL_HT-SELEX
0.842 0.865
Neurog2
M08758_2.00
Mus musculus
VBRRCAGATGGB

VCCATCTGYYVB
Misc
Kulakovskiy et al.(2013)
NGN2_MOUSE.H11MO.0.C
0.842 0.865
NEUROG2
M09879_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NGN2_Q3
0.842 0.865
NEUROG2
M04180_2.00
Homo sapiens
RVCATATGBY

RVCATATGBY
SELEX
Yin et al.(2017)
NEUROG2_eDBD_Methyl-HT-SELEX
0.842 0.865
NEUROG2
M04182_2.00
Homo sapiens
RMCRTRTGYY

RRCAYAYGKY
SELEX
Yin et al.(2017)
NEUROG2_FL_Methyl-HT-SELEX
0.842 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_90049 bHLH 124 176

Links

Other bHLH family TFs
Other Branchiostoma floridae TFs

Invalid Input OrderBy

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action