CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.chr_20_#_144
(
Ostreococcus RCC809
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
fgenesh1_pg.chr_20_#_144
T048497_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
fgenesh1_pg.C_Chr_14.0001000151
M01769_2.00
Ostreococcus tauri
NVCACRYGYN
NRCRYGTGBN
PBM
Weirauch et al.(2014)
pTH7762
0.851
0.788
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.chr_20_#_144
bHLH
104
155
ARKTKSTREKRRRDVLNSRFEELIAVLEPGSMMKADKATVVVAATQLIKQLR
Links
Other
bHLH
family TFs
Other
Ostreococcus RCC809
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.C_Chr_14.0001000151
Ostreococcus tauri
fgenesh1_pg.C_Chr_14.0001000151
D
0.851