CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf002701m
(
Mimulus guttatus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
mgf002701m
T048724_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BHLH80
M06722_2.00
Arabidopsis thaliana
DNCMACTTGCH
DGCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH80_col_a
0.914
0.941
BHLH80
M06723_2.00
Arabidopsis thaliana
DKCMACTTGCA
TGCAAGTKGMH
Dap-seq
OMalley et al.(2016)
bHLH80_colamp_a
0.914
0.941
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN
NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.873
0.882
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf002701m
bHLH
164
214
ATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVVYVKFLQ
Links
Other
bHLH
family TFs
Other
Mimulus guttatus
TFs
168 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy