CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22024635m.g
(
Octopus bimaculoides
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Ocbimv22024635m.g
T048863_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SREBF1
M04062_2.00
Homo sapiens
VHCACVCSAY
RTSGBGTGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_1
0.858
0.902
SREBF1
M04063_2.00
Homo sapiens
VHCRCGYGDB
VHCRCGYGDB
SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_2
0.858
0.902
SREBF1
M08048_2.00
Homo sapiens
VTCACSCCAY
RTGGSGTGAB
ChIP-seq
Mathelier et al.(2014)
MA0595.1
0.858
0.902
SREBF1
M08711_2.00
Homo sapiens
VTCACVYSAYH
DRTSRBGTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_HUMAN.H11MO.0.A
0.858
0.902
SREBF1
M09796_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBF1_02
0.858
0.902
SREBF1
M09797_2.00
Homo sapiens
NATCACGTGAB
VTCACGTGATN
Transfac
Matys et al.(2006)
V$SREBP1_01
0.858
0.902
SREBF1
M09798_2.00
Homo sapiens
KRTCACCCCAC
GTGGGGTGAYM
Transfac
Matys et al.(2006)
V$SREBP1_02
0.858
0.902
SREBF1
M09799_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q5
0.858
0.902
SREBF1
M09800_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6_01
0.858
0.902
SREBF1
M09801_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SREBP1_Q6
0.858
0.902
SREBF1
M04064_2.00
Homo sapiens
MTCACVCCAY
RTGGBGTGAK
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_1
0.858
0.902
SREBF1
M04065_2.00
Homo sapiens
RTCACCTGAY
RTCAGGTGAY
SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_2
0.858
0.902
Srebf1
M00754_2.00
Mus musculus
VWCAYVYSAB
VTSRBRTGWB
PBM
Weirauch et al.(2013)
pTH0914
0.858
0.882
Srebf1
M01724_2.00
Mus musculus
RWCAYVYBD
HVRBRTGWY
PBM
Weirauch et al.(2014)
pTH5161
0.858
0.882
Srebf1
M02816_2.00
Mus musculus
RTCACGTGAY
RTCACGTGAY
SELEX
Jolma et al.(2013)
Srebf1_1
0.858
0.882
Srebf1
M08749_2.00
Mus musculus
VTCASSYSABN
NVTSRSSTGAB
Misc
Kulakovskiy et al.(2013)
SRBP1_MOUSE.H11MO.0.B
0.858
0.882
HLH106
M03626_2.00
Drosophila melanogaster
RTCACGTGAY
RTCACGTGAY
SELEX
Nitta et al.(2015)
HLH106_1
0.858
0.784
HLH106
M03627_2.00
Drosophila melanogaster
NRTCACGCCAYH
DRTGGCGTGAYN
SELEX
Nitta et al.(2015)
HLH106_2
0.858
0.784
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22024634m.p
bHLH
388
438
KRTAHNAIEKRYRLSINDKIIELKNLVVGTEAKLNKSAILRKAIDYIRYIQ
Ocbimv22024635m.p
bHLH
388
438
KRTAHNAIEKRYRLSINDKIIELKNLVVGTEAKLNKSAILRKAIDYIRYIQ
Ocbimv22024636m.p
bHLH
214
264
KRTAHNAIEKRYRLSINDKIIELKNLVVGTEAKLNKSAILRKAIDYIRYIQ
Ocbimv22024637m.p
bHLH
214
264
KRTAHNAIEKRYRLSINDKIIELKNLVVGTEAKLNKSAILRKAIDYIRYIQ
Links
Other
bHLH
family TFs
Other
Octopus bimaculoides
TFs
84 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSGMOG00000011626
Gadus morhua
ENSGMOG00000011626
I
0.890
LotgiG224211
Lottia gigantea
LotgiG224211
I
0.882
SREBF1
Taeniopygia guttata
ENSTGUG00000007313
I
0.858
ENSSTOG00000014939
Ictidomys tridecemlineatus
ENSSTOG00000014939
I
0.858
srebf1
Tetraodon nigroviridis
ENSTNIG00000011957
I
0.858
ENSXMAG00000014774
Xiphophorus maculatus
ENSXMAG00000014774
I
0.858
SREBP
Drosophila ananassae
FBgn0100584
I
0.858
SREBP
Drosophila pseudoobscura
FBgn0081122
I
0.858
srebf1
Takifugu rubripes
ENSTRUG00000008197
I
0.858
ENSSSCG00000023124
Sus scrofa
ENSSSCG00000023124
I
0.858
SREBF1
Procavia capensis
ENSPCAG00000014903
I
0.858
ENSPANG00000023675
Papio anubis
ENSPANG00000023675
I
0.858
srebf1
Oryzias latipes
ENSORLG00000009437
I
0.858
ENSPPYG00000008037
Pongo abelii
ENSPPYG00000008037
I
0.858
SREBF1
Pteropus vampyrus
ENSPVAG00000005765
I
0.858
ENSSHAG00000018607
Sarcophilus harrisii
ENSSHAG00000018607
I
0.858
Srebf1
Rattus norvegicus
ENSRNOG00000003463
I
0.858
SREBP
Drosophila erecta
FBgn0108291
I
0.858
SREBP
Drosophila persimilis
FBgn0153336
I
0.858
ENSP00000348069
Macaca fascicularis
ENSP00000348069
I
0.858
Aan_R009070
Calypte anna
Aan_R009070
I
0.858
YQE_07365
Dendroctonus ponderosae
YQE_07365
I
0.858
Gfo_R006283
Geospiza fortis
Gfo_R006283
I
0.858
Myotis_brandtii_SREBF1_10023215
Myotis brandtii
Myotis_brandtii_SREBF1_10023215
I
0.858
XP_002944649
Xenopus tropicalis
XP_002944649
I
0.858
srebf1
Xenopus tropicalis
XB-GENE-987572
I
0.858
NV10553
Nasonia vitripennis
NV10553
I
0.858
HLH106
Drosophila melanogaster
FBgn0261283
D
0.858
SREBP
Drosophila sechellia
FBgn0174544
I
0.858
SREBF1
Ochotona princeps
ENSOPRG00000015069
I
0.858
SREBP
Drosophila simulans
FBgn0186498
I
0.858
SREBP
Drosophila virilis
FBgn0198580
I
0.858
SREBP
Drosophila yakuba
FBgn0236960
I
0.858
SREBP
Drosophila willistoni
FBgn0219495
I
0.858
SREBP
Drosophila grimshawi
FBgn0122129
I
0.858
ENSPFOG00000010306
Poecilia formosa
ENSPFOG00000010306
I
0.858
SREBF1
Equus caballus
ENSECAG00000019802
I
0.858
ENSONIG00000002304
Oreochromis niloticus
ENSONIG00000002304
I
0.858
srebf1
Danio rerio
ENSDARG00000067607
I
0.858
SREBF1
Echinops telfairi
ENSETEG00000004179
I
0.858
ENSFALG00000013762
Ficedula albicollis
ENSFALG00000013762
I
0.858
SREBF1
Homo sapiens
ENSG00000072310
D
0.858
SREBF1
Felis catus
ENSFCAG00000001983
I
0.858
ENSCSAG00000008412
Chlorocebus sabaeus
ENSCSAG00000008412
I
0.858
SREBF1
Cavia porcellus
ENSCPOG00000002439
I
0.858
ENSAMEG00000005129
Ailuropoda melanoleuca
ENSAMEG00000005129
I
0.858
CGI_10004108
Crassostrea gigas
CGI_10004108
I
0.858
ENSAMXG00000009016
Astyanax mexicanus
ENSAMXG00000009016
I
0.858
SREBF1
Bos taurus
ENSBTAG00000007884
I
0.858
SREBF1
Callithrix jacchus
ENSCJAG00000008953
I
0.858
SREBF1
Canis familiaris
ENSCAFG00000018436
I
0.858
srebf1
Gasterosteus aculeatus
ENSGACG00000012064
I
0.858
Srebf1
Dipodomys ordii
ENSDORG00000012333
I
0.858
Srebf1
Mus musculus
ENSMUSG00000020538
D
0.858
SREBF1
Gallus gallus
ENSGALG00000027188
I
0.858
ENSNLEG00000013625
Nomascus leucogenys
ENSNLEG00000013625
I
0.858
SREBF1
Ornithorhynchus anatinus
ENSOANG00000012278
I
0.858
SREBF1
Otolemur garnettii
ENSOGAG00000002910
I
0.858
ENSOARG00000001504
Ovis aries
ENSOARG00000001504
I
0.858
SREBF1
Monodelphis domestica
ENSMODG00000014074
I
0.858
ENSMPUG00000000024
Mustela putorius furo
ENSMPUG00000000024
I
0.858
SREBF1
Macaca mulatta
ENSMMUG00000023375
I
0.858
ENSMEUG00000001306
Macropus eugenii
ENSMEUG00000001306
I
0.858
SREBF1
Loxodonta africana
ENSLAFG00000021644
I
0.858
ENSLACG00000013149
Latimeria chalumnae
ENSLACG00000013149
I
0.858
SREBF1
Gorilla gorilla
ENSGGOG00000002713
I
0.858
SREBF1
Microcebus murinus
ENSMICG00000012535
I
0.858
ENSLOCG00000008766
Lepisosteus oculatus
ENSLOCG00000008766
I
0.858
GB54953
Apis mellifera
GB54953
I
0.856
L798_14382
Zootermopsis nevadensis
L798_14382
I
0.856
Hsal_02671--XP_396866.3_APIME
Harpegnathos saltator
Hsal_02671--XP_396866.3_APIME
I
0.856
SMAR011485
Strigamia maritima
SMAR011485
I
0.856
SINV16629
Solenopsis invicta
SINV16629
I
0.856
KGM_21476
Danaus plexippus
KGM_21476
I
0.853
HMEL008680
Heliconius melpomene
HMEL008680
I
0.853
CBG13284
Caenorhabditis briggsae
CBG13284
N
0.848
Hba_16772
Heterorhabditis bacteriophora
Hba_16772
N
0.848
CBN06619
Caenorhabditis brenneri
CBN06619
N
0.848
CRE01076
Caenorhabditis remanei
CRE01076
N
0.848
MDOA000648
Musca domestica
MDOA000648
I
0.847
LCUP004742
Lucilia cuprina
LCUP004742
I
0.847
CapteG165299
Capitella teleta
CapteG165299
I
0.847
HelroG138368
Helobdella robusta
HelroG138368
I
0.839