CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30007563m.g
(
Saccoglossus kowalevskii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Sakowv30007563m.g
T048898_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Mxi1
M08754_2.00
Mus musculus
VCACGTGBSNBBNNV
BNNVVNSVCACGTGB
Misc
Kulakovskiy et al.(2013)
MXI1_MOUSE.H11MO.0.A
0.852
0.750
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23948490_peptide
bHLH
49
101
SRSTHNELEKNRRAHLRNCLEGLKEMVPLGPEATRHTTLGLLTKARVFIKNLE
23948491_peptide
bHLH
48
100
SRSTHNELEKNRRAHLRNCLEGLKEMVPLGPEATRHTTLGLLTKARVFIKNLE
23948492_peptide
bHLH
47
99
SRSTHNELEKNRRAHLRNCLEGLKEMVPLGPEATRHTTLGLLTKARVFIKNLE
Links
Other
bHLH
family TFs
Other
Saccoglossus kowalevskii
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy