CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sakowv30016776m.g
(
Saccoglossus kowalevskii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Sakowv30016776m.g
T048911_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dimm
M03613_2.00
Drosophila melanogaster
BDCCATATGGHV
BDCCATATGGHV
SELEX
Nitta et al.(2015)
dimm_1
0.874
0.865
dimm
M03614_2.00
Drosophila melanogaster
BACCATATGGTV
BACCATATGGTV
SELEX
Nitta et al.(2015)
dimm_2
0.874
0.865
dimm
M05976_2.00
Drosophila melanogaster
HCCATATGGYG
CRCCATATGGD
B1H
Zhu et al.(2011)
dimm_da_SANGER_5_FBgn0023091
0.874
0.865
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23940560_peptide
bHLH
123
175
RRLESNERERMRMHSLNDAFQNLRDVIPHVNCERKLSKIETLTLAKNYISALT
Links
Other
bHLH
family TFs
Other
Saccoglossus kowalevskii
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy