CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_012_00203
(
Aquilegia coerulea
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Aquca_012_00203
T048988_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G22750
M06730_2.00
Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK
Dap-seq
OMalley et al.(2016)
bHLH18_col_a
0.854
0.646
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_012_00203.1
bHLH
57
104
QDHVIAERMRREKLSQRFIDLATIVPGLKKMDKSSVLGDCINYLIQLQ
Links
Other
bHLH
family TFs
Other
Aquilegia coerulea
TFs
113 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc06g064590.1
Solanum lycopersicum
Solyc06g064590.1
N
0.877
Cucsa.218800
Cucumis sativus
Cucsa.218800
I
0.856
cassava37087.valid.m1
Manihot esculenta
cassava37087.valid.m1
I
0.856
cassava35671.valid.m1
Manihot esculenta
cassava35671.valid.m1
I
0.856
Aquca_010_00012
Aquilegia coerulea
Aquca_010_00012
I
0.856
cassava20178.m1
Manihot esculenta
cassava20178.m1
I
0.856
Bostr.19427s0042
Boechera stricta
Bostr.19427s0042
I
0.856
Ciclev10028925m.g
Citrus clementina
Ciclev10028925m.g
I
0.856
Carubv10025041m.g
Capsella rubella
Carubv10025041m.g
I
0.856
Cagra.5392s0006
Capsella grandiflora
Cagra.5392s0006
I
0.856
cassava18197.valid.m1
Manihot esculenta
cassava18197.valid.m1
I
0.856
AMTR_s00033p00078670
Amborella trichopoda
AMTR_s00033p00078670
I
0.856
Cla000123
Citrullus lanatus
Cla000123
I
0.856
VIT_07s0205g00160
Vitis vinifera
VIT_07s0205g00160
I
0.856
VIT_03s0088g01240
Vitis vinifera
VIT_03s0088g01240
I
0.856
Pm002305
Prunus mume
Pm002305
I
0.856
Pm021008
Prunus mume
Pm021008
I
0.856
29804.m001498
Ricinus communis
29804.m001498
I
0.856
28179.m000479
Ricinus communis
28179.m000479
I
0.856
28179.m000478
Ricinus communis
28179.m000478
I
0.856
Eucgr.I00634
Eucalyptus grandis
Eucgr.I00634
I
0.856
Eucgr.I02518
Eucalyptus grandis
Eucgr.I02518
I
0.856
Pavir.J35103
Panicum virgatum
Pavir.J35103
I
0.856
Pavir.J01849
Panicum virgatum
Pavir.J01849
I
0.856
orange1.1g021208m.g
Citrus sinensis
orange1.1g021208m.g
I
0.856
MDP0000502440
Malus domestica
MDP0000502440
I
0.856
SapurV1A.0019s0910
Salix purpurea
SapurV1A.0019s0910
I
0.856
SapurV1A.0279s0180
Salix purpurea
SapurV1A.0279s0180
I
0.856
PK11573.1
Cannabis sativa
PK11573.1
I
0.856
PK09122.1
Cannabis sativa
PK09122.1
I
0.856
SapurV1A.3034s0010
Salix purpurea
SapurV1A.3034s0010
I
0.856
MDP0000291132
Malus domestica
MDP0000291132
I
0.856
MDP0000174149
Malus domestica
MDP0000174149
I
0.856
gene05612-v1.0-hybrid
Fragaria vesca
gene05612-v1.0-hybrid
I
0.856
gene05610-v1.0-hybrid
Fragaria vesca
gene05610-v1.0-hybrid
I
0.856
evm.TU.supercontig_129.37
Carica papaya
evm.TU.supercontig_129.37
I
0.856
Gorai.002G211500
Gossypium raimondii
Gorai.002G211500
I
0.856
Gorai.003G034700
Gossypium raimondii
Gorai.003G034700
I
0.856
Lus10039639.g
Linum usitatissimum
Lus10039639.g
I
0.856
Lus10003488.g
Linum usitatissimum
Lus10003488.g
I
0.856
Gorai.007G228900
Gossypium raimondii
Gorai.007G228900
I
0.856
TCM_000895
Theobroma cacao
TCM_000895
I
0.856
cassava16019.m1
Manihot esculenta
cassava16019.m1
I
0.856
ONIVA03G34090
Oryza nivara
ONIVA03G34090
I
0.856
OMERI03G29350
Oryza meridionalis
OMERI03G29350
I
0.856
OPUNC03G29750
Oryza punctata
OPUNC03G29750
I
0.856
ORGLA03G0295100
Oryza glaberrima
ORGLA03G0295100
I
0.856
OS03G0725800
Oryza sativa
OS03G0725800
I
0.856
ORUFI03G33950
Oryza rufipogon
ORUFI03G33950
I
0.856
OGLUM03G32210
Oryza glumaepatula
OGLUM03G32210
I
0.856
OBART03G32580
Oryza barthii
OBART03G32580
I
0.856
fgenesh2_kg.4__196__AT2G22750.1
Arabidopsis lyrata
fgenesh2_kg.4__196__AT2G22750.1
I
0.856
BGIOSGA013493
Oryza indica
BGIOSGA013493
I
0.856
GRMZM2G019806
Zea mays
GRMZM2G019806
I
0.856
GRMZM2G082343
Zea mays
GRMZM2G082343
I
0.856
LPERR03G27220
Leersia perrieri
LPERR03G27220
I
0.856
GSMUA_Achr2G08590_001
Musa acuminata
GSMUA_Achr2G08590_001
I
0.856
POPTR_0001s29400
Populus trichocarpa
POPTR_0001s29400
I
0.856
GSMUA_AchrUn_randomG15440_001
Musa acuminata
GSMUA_AchrUn_randomG15440_001
I
0.856
Si036393m.g
Setaria italica
Si036393m.g
I
0.856
SELMODRAFT_34848
Selaginella moellendorffii
SELMODRAFT_34848
I
0.856
SELMODRAFT_48361
Selaginella moellendorffii
SELMODRAFT_48361
I
0.856
Sb01g009590
Sorghum bicolor
Sb01g009590
I
0.856
PRUPE_ppa017640mg
Prunus persica
PRUPE_ppa017640mg
I
0.856
POPTR_0005s09810
Populus trichocarpa
POPTR_0005s09810
I
0.856
PRUPE_ppa008130mg
Prunus persica
PRUPE_ppa008130mg
I
0.856
POPTR_0009s08500
Populus trichocarpa
POPTR_0009s08500
I
0.856
MDP0000318216
Malus domestica
MDP0000318216
I
0.854
Bra039924
Brassica rapa
Bra039924
I
0.854
GLYMA11G04690
Glycine max
GLYMA11G04690
I
0.854
MDP0000159571
Malus domestica
MDP0000159571
I
0.854
MDP0000170202
Malus domestica
MDP0000170202
I
0.854
Thhalv10000426m.g
Eutrema salsugineum
Thhalv10000426m.g
I
0.854
AT2G22750
Arabidopsis thaliana
AT2G22750
D
0.854
PDK_20s1394471g002
Phoenix dactylifera
PDK_20s1394471g002
I
0.854
Solyc01g106460.2
Solanum lycopersicum
Solyc01g106460.2
I
0.854
Bo4g150960
Brassica oleracea
Bo4g150960
I
0.854
orange1.1g037441m.g
Citrus sinensis
orange1.1g037441m.g
I
0.854
Bra030210
Brassica rapa
Bra030210
I
0.854
PGSC0003DMG400005101
Solanum tuberosum
PGSC0003DMG400005101
I
0.854
Ciclev10027158m.g
Citrus clementina
Ciclev10027158m.g
I
0.854
evm.TU.supercontig_20.63
Carica papaya
evm.TU.supercontig_20.63
I
0.854
PDK_20s1524891g002
Phoenix dactylifera
PDK_20s1524891g002
I
0.853
TCM_006357
Theobroma cacao
TCM_006357
I
0.853
Lus10020503.g
Linum usitatissimum
Lus10020503.g
I
0.853
LjT17L12.80.nd
Lotus japonicus
LjT17L12.80.nd
I
0.853
Lus10012457.g
Linum usitatissimum
Lus10012457.g
I
0.853
Eucgr.H02389
Eucalyptus grandis
Eucgr.H02389
I
0.851
Eucgr.H02390
Eucalyptus grandis
Eucgr.H02390
I
0.851
chr2.CM0021.410.nc
Lotus japonicus
chr2.CM0021.410.nc
I
0.850
Bra011790
Brassica rapa
Bra011790
I
0.845
Bo1g003350
Brassica oleracea
Bo1g003350
I
0.845
Thhalv10025715m.g
Eutrema salsugineum
Thhalv10025715m.g
I
0.845
Bo3g153150
Brassica oleracea
Bo3g153150
I
0.845
BHLH25
Arabidopsis thaliana
AT4G37850
I
0.845
Cagra.6066s0006
Capsella grandiflora
Cagra.6066s0006
I
0.845
Carubv10006834m.g
Capsella rubella
Carubv10006834m.g
I
0.845
Bra010617
Brassica rapa
Bra010617
I
0.845
VIT_00s0824g00020
Vitis vinifera
VIT_00s0824g00020
I
0.843
Ciclev10027504m.g
Citrus clementina
Ciclev10027504m.g
I
0.843
VIT_00s0927g00010
Vitis vinifera
VIT_00s0927g00010
I
0.843
orange1.1g026436m.g
Citrus sinensis
orange1.1g026436m.g
I
0.843
GLYMA07G30420
Glycine max
GLYMA07G30420
I
0.843
SapurV1A.0821s0050
Salix purpurea
SapurV1A.0821s0050
I
0.842
Gorai.007G229000
Gossypium raimondii
Gorai.007G229000
I
0.841
Gorai.003G034600
Gossypium raimondii
Gorai.003G034600
I
0.841
TCM_000894
Theobroma cacao
TCM_000894
I
0.841
Ca_02263
Cicer arietinum
Ca_02263
I
0.840
gene07355-v1.0-hybrid
Fragaria vesca
gene07355-v1.0-hybrid
I
0.840
GLYMA01G40620
Glycine max
GLYMA01G40620
I
0.839
MTR_5g014520
Medicago truncatula
MTR_5g014520
I
0.839
Ca_02264
Cicer arietinum
Ca_02264
I
0.839
Gorai.008G087600
Gossypium raimondii
Gorai.008G087600
I
0.838