Bostr.19427s0042 (Boechera stricta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Bostr.19427s0042 T049098_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.854 0.918
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.19427s0042.1.p bHLH 148 196

Links

Other bHLH family TFs
Other Boechera stricta TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VIT_07s0205g00180 Vitis vinifera VIT_07s0205g00180 N 0.879
Si036393m.g Setaria italica Si036393m.g I 0.856
SELMODRAFT_48361 Selaginella moellendorffii SELMODRAFT_48361 I 0.856
SELMODRAFT_34848 Selaginella moellendorffii SELMODRAFT_34848 I 0.856
TCM_000895 Theobroma cacao TCM_000895 I 0.856
Eucgr.I02518 Eucalyptus grandis Eucgr.I02518 I 0.856
Ciclev10028925m.g Citrus clementina Ciclev10028925m.g I 0.856
SapurV1A.3034s0010 Salix purpurea SapurV1A.3034s0010 I 0.856
Eucgr.I00634 Eucalyptus grandis Eucgr.I00634 I 0.856
Sb01g009590 Sorghum bicolor Sb01g009590 I 0.856
PRUPE_ppa017640mg Prunus persica PRUPE_ppa017640mg I 0.856
evm.TU.supercontig_129.37 Carica papaya evm.TU.supercontig_129.37 I 0.856
Carubv10025041m.g Capsella rubella Carubv10025041m.g I 0.856
ORGLA03G0295100 Oryza glaberrima ORGLA03G0295100 I 0.856
OS03G0725800 Oryza sativa OS03G0725800 I 0.856
POPTR_0001s29400 Populus trichocarpa POPTR_0001s29400 I 0.856
PRUPE_ppa008130mg Prunus persica PRUPE_ppa008130mg I 0.856
POPTR_0009s08500 Populus trichocarpa POPTR_0009s08500 I 0.856
POPTR_0005s09810 Populus trichocarpa POPTR_0005s09810 I 0.856
VIT_03s0088g01240 Vitis vinifera VIT_03s0088g01240 I 0.856
VIT_07s0205g00160 Vitis vinifera VIT_07s0205g00160 I 0.856
cassava35671.valid.m1 Manihot esculenta cassava35671.valid.m1 I 0.856
cassava20178.m1 Manihot esculenta cassava20178.m1 I 0.856
cassava18197.valid.m1 Manihot esculenta cassava18197.valid.m1 I 0.856
cassava37087.valid.m1 Manihot esculenta cassava37087.valid.m1 I 0.856
Cucsa.218800 Cucumis sativus Cucsa.218800 I 0.856
Cagra.5392s0006 Capsella grandiflora Cagra.5392s0006 I 0.856
Aquca_012_00203 Aquilegia coerulea Aquca_012_00203 I 0.856
Aquca_010_00012 Aquilegia coerulea Aquca_010_00012 I 0.856
cassava16019.m1 Manihot esculenta cassava16019.m1 I 0.856
29804.m001498 Ricinus communis 29804.m001498 I 0.856
Cla000123 Citrullus lanatus Cla000123 I 0.856
SapurV1A.0279s0180 Salix purpurea SapurV1A.0279s0180 I 0.856
AMTR_s00033p00078670 Amborella trichopoda AMTR_s00033p00078670 I 0.856
Pm002305 Prunus mume Pm002305 I 0.856
Pm021008 Prunus mume Pm021008 I 0.856
28179.m000479 Ricinus communis 28179.m000479 I 0.856
28179.m000478 Ricinus communis 28179.m000478 I 0.856
OPUNC03G29750 Oryza punctata OPUNC03G29750 I 0.856
ORUFI03G33950 Oryza rufipogon ORUFI03G33950 I 0.856
PK09122.1 Cannabis sativa PK09122.1 I 0.856
Lus10003488.g Linum usitatissimum Lus10003488.g I 0.856
GRMZM2G019806 Zea mays GRMZM2G019806 I 0.856
gene05610-v1.0-hybrid Fragaria vesca gene05610-v1.0-hybrid I 0.856
GSMUA_AchrUn_randomG15440_001 Musa acuminata GSMUA_AchrUn_randomG15440_001 I 0.856
GSMUA_Achr2G08590_001 Musa acuminata GSMUA_Achr2G08590_001 I 0.856
fgenesh2_kg.4__196__AT2G22750.1 Arabidopsis lyrata fgenesh2_kg.4__196__AT2G22750.1 I 0.856
Lus10039639.g Linum usitatissimum Lus10039639.g I 0.856
orange1.1g021208m.g Citrus sinensis orange1.1g021208m.g I 0.856
Pavir.J01849 Panicum virgatum Pavir.J01849 I 0.856
BGIOSGA013493 Oryza indica BGIOSGA013493 I 0.856
MDP0000502440 Malus domestica MDP0000502440 I 0.856
MDP0000174149 Malus domestica MDP0000174149 I 0.856
MDP0000291132 Malus domestica MDP0000291132 I 0.856
Pavir.J35103 Panicum virgatum Pavir.J35103 I 0.856
GRMZM2G082343 Zea mays GRMZM2G082343 I 0.856
OGLUM03G32210 Oryza glumaepatula OGLUM03G32210 I 0.856
SapurV1A.0019s0910 Salix purpurea SapurV1A.0019s0910 I 0.856
OBART03G32580 Oryza barthii OBART03G32580 I 0.856
Gorai.002G211500 Gossypium raimondii Gorai.002G211500 I 0.856
PK11573.1 Cannabis sativa PK11573.1 I 0.856
Gorai.003G034700 Gossypium raimondii Gorai.003G034700 I 0.856
ONIVA03G34090 Oryza nivara ONIVA03G34090 I 0.856
OMERI03G29350 Oryza meridionalis OMERI03G29350 I 0.856
gene05612-v1.0-hybrid Fragaria vesca gene05612-v1.0-hybrid I 0.856
Gorai.007G228900 Gossypium raimondii Gorai.007G228900 I 0.856
LPERR03G27220 Leersia perrieri LPERR03G27220 I 0.856
MDP0000170202 Malus domestica MDP0000170202 I 0.854
MDP0000159571 Malus domestica MDP0000159571 I 0.854
MDP0000318216 Malus domestica MDP0000318216 I 0.854
Bo4g150960 Brassica oleracea Bo4g150960 I 0.854
PGSC0003DMG400005101 Solanum tuberosum PGSC0003DMG400005101 I 0.854
Ciclev10027158m.g Citrus clementina Ciclev10027158m.g I 0.854
PDK_20s1394471g002 Phoenix dactylifera PDK_20s1394471g002 I 0.854
orange1.1g037441m.g Citrus sinensis orange1.1g037441m.g I 0.854
Solyc01g106460.2 Solanum lycopersicum Solyc01g106460.2 I 0.854
GLYMA11G04690 Glycine max GLYMA11G04690 I 0.854
AT2G22750 Arabidopsis thaliana AT2G22750 D 0.854
Bra039924 Brassica rapa Bra039924 I 0.854
Thhalv10000426m.g Eutrema salsugineum Thhalv10000426m.g I 0.854
evm.TU.supercontig_20.63 Carica papaya evm.TU.supercontig_20.63 I 0.854
Bra030210 Brassica rapa Bra030210 I 0.854
Lus10020503.g Linum usitatissimum Lus10020503.g I 0.853
Lus10012457.g Linum usitatissimum Lus10012457.g I 0.853
TCM_006357 Theobroma cacao TCM_006357 I 0.853
OBART03G09330 Oryza barthii OBART03G09330 N 0.853
OGLUM03G09410 Oryza glumaepatula OGLUM03G09410 N 0.853
OMERI03G08710 Oryza meridionalis OMERI03G08710 N 0.853
ONIVA02G39270 Oryza nivara ONIVA02G39270 N 0.853
MLOC_56065 Hordeum vulgare MLOC_56065 N 0.853
LPERR03G08340 Leersia perrieri LPERR03G08340 N 0.853
BGIOSGA011179 Oryza indica BGIOSGA011179 N 0.853
F775_04526 Aegilops tauschii F775_04526 N 0.853
PDK_20s1524891g002 Phoenix dactylifera PDK_20s1524891g002 I 0.853
OPUNC03G08950 Oryza punctata OPUNC03G08950 N 0.853
OB03G19470 Oryza brachyantha OB03G19470 N 0.853
ORUFI03G09460 Oryza rufipogon ORUFI03G09460 N 0.853
Traes_4DL_9477862E8 Triticum aestivum Traes_4DL_9477862E8 N 0.853
Traes_4BL_2F534B325 Triticum aestivum Traes_4BL_2F534B325 N 0.853
LjT17L12.80.nd Lotus japonicus LjT17L12.80.nd I 0.853
Eucgr.H02390 Eucalyptus grandis Eucgr.H02390 I 0.851
Eucgr.H02389 Eucalyptus grandis Eucgr.H02389 I 0.851
chr2.CM0021.410.nc Lotus japonicus chr2.CM0021.410.nc I 0.850
Bo8g100890 Brassica oleracea Bo8g100890 N 0.849
Bo4g151000 Brassica oleracea Bo4g151000 N 0.849
Thhalv10000494m.g Eutrema salsugineum Thhalv10000494m.g N 0.849
Bra030208 Brassica rapa Bra030208 N 0.849
Bra039926 Brassica rapa Bra039926 N 0.849
BHLH25 Arabidopsis thaliana AT4G37850 I 0.845
Cagra.6066s0006 Capsella grandiflora Cagra.6066s0006 I 0.845
Bo3g153150 Brassica oleracea Bo3g153150 I 0.845
Bo1g003350 Brassica oleracea Bo1g003350 I 0.845
Bra010617 Brassica rapa Bra010617 I 0.845
Thhalv10025715m.g Eutrema salsugineum Thhalv10025715m.g I 0.845
Carubv10006834m.g Capsella rubella Carubv10006834m.g I 0.845
Bra011790 Brassica rapa Bra011790 I 0.845
VIT_00s0927g00010 Vitis vinifera VIT_00s0927g00010 I 0.843
VIT_00s0824g00020 Vitis vinifera VIT_00s0824g00020 I 0.843
GLYMA07G30420 Glycine max GLYMA07G30420 I 0.843
orange1.1g026436m.g Citrus sinensis orange1.1g026436m.g I 0.843
Ciclev10027504m.g Citrus clementina Ciclev10027504m.g I 0.843
SapurV1A.0821s0050 Salix purpurea SapurV1A.0821s0050 I 0.842
Gorai.007G229000 Gossypium raimondii Gorai.007G229000 I 0.841
Gorai.003G034600 Gossypium raimondii Gorai.003G034600 I 0.841
TCM_000894 Theobroma cacao TCM_000894 I 0.841
Ca_02263 Cicer arietinum Ca_02263 I 0.840
OS03G0229100 Oryza sativa OS03G0229100 N 0.840
gene07355-v1.0-hybrid Fragaria vesca gene07355-v1.0-hybrid I 0.840
MTR_5g014520 Medicago truncatula MTR_5g014520 I 0.839
GLYMA01G40620 Glycine max GLYMA01G40620 I 0.839
Ca_02264 Cicer arietinum Ca_02264 I 0.839
Gorai.008G087600 Gossypium raimondii Gorai.008G087600 I 0.838