Cagra.1225s0009 (Capsella grandiflora)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cagra.1225s0009 T049245_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G22750
M06730_2.00
Arabidopsis thaliana
MRYGTKDNHCACGTGNN

NNCACGTGDNHMACRYK
Dap-seq
OMalley et al.(2016)
bHLH18_col_a
0.844 0.480
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1225s0009.1.p bHLH 247 296

Links

Other bHLH family TFs
Other Capsella grandiflora TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSCPOG00000003326 Cavia porcellus ENSCPOG00000003326 I 0.000
ENSDORG00000010277 Dipodomys ordii ENSDORG00000010277 I 0.000
ENSPPYG00000018878 Pongo abelii ENSPPYG00000018878 I 0.000
MYC Pan troglodytes ENSPTRG00000020581 I 0.000
Myc Mus musculus ENSMUSG00000022346 D 0.000
MYC Myotis lucifugus ENSMLUG00000026933 I 0.000
MYC Loxodonta africana ENSLAFG00000001410 I 0.000
MYC Gorilla gorilla ENSGGOG00000012135 I 0.000
MYC Homo sapiens ENSG00000136997 D 0.000
myc Xenopus tropicalis XB-GENE-6052814 I 0.000
Myotis_brandtii_MYC_10012350 Myotis brandtii Myotis_brandtii_MYC_10012350 I 0.000