CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cagra.1671s0248
(
Capsella grandiflora
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Cagra.1671s0248
T049265_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1671s0248.1.p
bHLH
210
259
RKRKVFPTERERRVHFKDRFGDLKSLIPNPTKHDRASIVGEAIDYIKELL
Links
Other
bHLH
family TFs
Other
Capsella grandiflora
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10009189m.g
Capsella rubella
Carubv10009189m.g
N
0.914
Bostr.25219s0340
Boechera stricta
Bostr.25219s0340
N
0.901
fgenesh1_pg.C_scaffold_1000487
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1000487
N
0.901
Bra015480
Brassica rapa
Bra015480
N
0.901
Bo5g007310
Brassica oleracea
Bo5g007310
N
0.901