Cagra.2636s0012 (Capsella grandiflora)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cagra.2636s0012 T049291_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G42280
M06733_2.00
Arabidopsis thaliana
DNCMACTTGYH

DRCAAGTKGNH
Dap-seq
OMalley et al.(2016)
bHLH130_col_a
0.914 1.000
OS08G0506700
M01755_2.00
Oryza sativa
NCCACTTGN

NCAAGTGGN
PBM
Weirauch et al.(2014)
pTH8547
0.844 0.961
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2636s0012.1.p bHLH 289 339

Links

Other bHLH family TFs
Other Capsella grandiflora TFs

Invalid Input OrderBy

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action