Cagra.3344s0001 (Capsella grandiflora)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cagra.3344s0001 T049294_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3344s0001.1.p bHLH 18 60

Links

Other bHLH family TFs
Other Capsella grandiflora TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA034713 Oryza indica BGIOSGA034713 I 0.000
BGIOSGA036918 Oryza indica BGIOSGA036918 I 0.000
BGIOSGA036920 Oryza indica BGIOSGA036920 I 0.000
Ca_18090 Cicer arietinum Ca_18090 I 0.000
chr1.CM0104.240.nc Lotus japonicus chr1.CM0104.240.nc I 0.000
chr2.CM0641.320.nc Lotus japonicus chr2.CM0641.320.nc I 0.000
Cla010367 Citrullus lanatus Cla010367 I 0.000
Cucsa.284890 Cucumis sativus Cucsa.284890 I 0.000
e_gw1.15.275.1 Physcomitrella patens e_gw1.15.275.1 I 0.000
e_gw1.259.28.1 Physcomitrella patens e_gw1.259.28.1 I 0.000
F775_26965 Aegilops tauschii F775_26965 I 0.000
Gorai.005G142300 Gossypium raimondii Gorai.005G142300 I 0.000
Gorai.008G179900 Gossypium raimondii Gorai.008G179900 I 0.000
GRMZM2G109627 Zea mays GRMZM2G109627 I 0.000
GRMZM2G127379 Zea mays GRMZM2G127379 I 0.000
GRMZM2G312201 Zea mays GRMZM2G312201 N 0.000
GRMZM2G430849 Zea mays GRMZM2G430849 I 0.000
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I 0.000
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.000
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.000
GSMUA_AchrUn_randomG17360_001 Musa acuminata GSMUA_AchrUn_randomG17360_001 I 0.000
LPERR11G01300 Leersia perrieri LPERR11G01300 I 0.000
LPERR12G01440 Leersia perrieri LPERR12G01440 I 0.000
Lus10026617.g Linum usitatissimum Lus10026617.g I 0.000
Lus10030446.g Linum usitatissimum Lus10030446.g I 0.000
Lus10037156.g Linum usitatissimum Lus10037156.g I 0.000
MDP0000481448 Malus domestica MDP0000481448 I 0.000
mgf022118m Mimulus guttatus mgf022118m I 0.000
MLOC_4747 Hordeum vulgare MLOC_4747 I 0.000
MTR_5g041940 Medicago truncatula MTR_5g041940 I 0.000
NAP Vitis vinifera VIT_01s0026g02710 I 0.000
OB11G11210 Oryza brachyantha OB11G11210 I 0.000
OB12G11500 Oryza brachyantha OB12G11500 I 0.000
OBART11G01590 Oryza barthii OBART11G01590 I 0.000
OBART12G01290 Oryza barthii OBART12G01290 I 0.000
OGLUM11G01310 Oryza glumaepatula OGLUM11G01310 I 0.000
OGLUM12G01870 Oryza glumaepatula OGLUM12G01870 I 0.000
OLONG_020632 Oryza longistaminata OLONG_020632 I 0.000
OLONG_026749 Oryza longistaminata OLONG_026749 I 0.000
OMERI12G00480 Oryza meridionalis OMERI12G00480 I 0.000
ONIVA11G01630 Oryza nivara ONIVA11G01630 I 0.000
OPUNC11G01330 Oryza punctata OPUNC11G01330 I 0.000
OPUNC12G01370 Oryza punctata OPUNC12G01370 I 0.000
ORGLA11G0013900 Oryza glaberrima ORGLA11G0013900 N 0.000
ORUFI12G01570 Oryza rufipogon ORUFI12G01570 I 0.000
OS11G0126900 Oryza sativa OS11G0126900 I 0.000
OS12G0123700 Oryza sativa OS12G0123700 I 0.000
Pavir.Ea00837 Panicum virgatum Pavir.Ea00837 I 0.000
Pavir.J23256 Panicum virgatum Pavir.J23256 I 0.000
Pavir.J23516 Panicum virgatum Pavir.J23516 I 0.000
PK25119.1 Cannabis sativa PK25119.1 I 0.000
POPTR_0005s20240 Populus trichocarpa POPTR_0005s20240 I 0.000
Sb05g001580 Sorghum bicolor Sb05g001580 I 0.000
Sb08g001940 Sorghum bicolor Sb08g001940 I 0.000
SELMODRAFT_133982 Selaginella moellendorffii SELMODRAFT_133982 I 0.000
SELMODRAFT_47266 Selaginella moellendorffii SELMODRAFT_47266 I 0.000
Si010410m.g Setaria italica Si010410m.g I 0.000
Si026530m.g Setaria italica Si026530m.g I 0.000
Si030267m.g Setaria italica Si030267m.g I 0.000
Traes_5BL_CC18CAD72 Triticum aestivum Traes_5BL_CC18CAD72 D 0.000