Cagra.8123s0001 (Capsella grandiflora)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cagra.8123s0001 T049320_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.8123s0001.1.p bHLH 177 222

Links

Other bHLH family TFs
Other Capsella grandiflora TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI3G53060 Brachypodium distachyon BRADI3G53060 N 0.914
GRMZM2G066057 Zea mays GRMZM2G066057 N 0.911
Sb03g008290 Sorghum bicolor Sb03g008290 N 0.911
F775_43492 Aegilops tauschii F775_43492 N 0.903
Traes_6BL_A964BE52B Triticum aestivum Traes_6BL_A964BE52B N 0.903
Traes_6DL_3DCFAB31F Triticum aestivum Traes_6DL_3DCFAB31F N 0.903
TRIUR3_27166 Triticum urartu TRIUR3_27166 N 0.903
Traes_6BL_9B25E6A10 Triticum aestivum Traes_6BL_9B25E6A10 N 0.903
F775_25020 Aegilops tauschii F775_25020 N 0.903
F775_03185 Aegilops tauschii F775_03185 N 0.883
Cla020067 Citrullus lanatus Cla020067 N 0.879
Ca_16136 Cicer arietinum Ca_16136 N 0.879
VIT_14s0006g01470 Vitis vinifera VIT_14s0006g01470 N 0.879
Pm014359 Prunus mume Pm014359 N 0.879
28609.m000209 Ricinus communis 28609.m000209 N 0.879
Cucsa.006340 Cucumis sativus Cucsa.006340 N 0.879
cassava10199.m1 Manihot esculenta cassava10199.m1 N 0.879
PRUPE_ppa025775mg Prunus persica PRUPE_ppa025775mg N 0.879
mgf025678m Mimulus guttatus mgf025678m N 0.879
AC216731.3_FG001 Zea mays AC216731.3_FG001 N 0.879
TRAES3BF060500180CFD_g Triticum aestivum TRAES3BF060500180CFD_g N 0.879
Traes_3AS_0D78930B4 Triticum aestivum Traes_3AS_0D78930B4 N 0.879
TCM_019210 Theobroma cacao TCM_019210 N 0.879
Si019575m.g Setaria italica Si019575m.g N 0.879
Aquca_041_00164 Aquilegia coerulea Aquca_041_00164 N 0.879
Solyc02g091440.1 Solanum lycopersicum Solyc02g091440.1 N 0.879
Sb04g030230 Sorghum bicolor Sb04g030230 N 0.879
BHLH86 Arabidopsis thaliana AT5G37800 N 0.879
TRIUR3_11692 Triticum urartu TRIUR3_11692 N 0.879
Bostr.9638s0100 Boechera stricta Bostr.9638s0100 N 0.879
Pavir.Aa00611 Panicum virgatum Pavir.Aa00611 N 0.879
orange1.1g038918m.g Citrus sinensis orange1.1g038918m.g N 0.879
MDP0000435722 Malus domestica MDP0000435722 N 0.879
Lus10033592.g Linum usitatissimum Lus10033592.g N 0.879
Pavir.J04215 Panicum virgatum Pavir.J04215 N 0.879
Pavir.J20533 Panicum virgatum Pavir.J20533 N 0.879
Thhalv10028239m.g Eutrema salsugineum Thhalv10028239m.g N 0.879
Thhalv10018927m.g Eutrema salsugineum Thhalv10018927m.g N 0.879
SapurV1A.0230s0340 Salix purpurea SapurV1A.0230s0340 N 0.879
SapurV1A.0102s0280 Salix purpurea SapurV1A.0102s0280 N 0.879
Lus10017634.g Linum usitatissimum Lus10017634.g N 0.879
Gorai.004G064400 Gossypium raimondii Gorai.004G064400 N 0.879
Carubv10021322m.g Capsella rubella Carubv10021322m.g N 0.879
Carubv10007389m.g Capsella rubella Carubv10007389m.g N 0.879
Cagra.2629s0001 Capsella grandiflora Cagra.2629s0001 N 0.879
POPTR_0005s14360 Populus trichocarpa POPTR_0005s14360 N 0.879
Ciclev10013420m.g Citrus clementina Ciclev10013420m.g N 0.879
Eucgr.F02831 Eucalyptus grandis Eucgr.F02831 N 0.879
Gorai.001G086800 Gossypium raimondii Gorai.001G086800 N 0.879
gene17937-v1.0-hybrid Fragaria vesca gene17937-v1.0-hybrid N 0.879
evm.TU.contig_27490 Carica papaya evm.TU.contig_27490 N 0.879
Bostr.26959s0271 Boechera stricta Bostr.26959s0271 N 0.879
RHD6 Arabidopsis lyrata scaffold_201372.1 N 0.879
GSMUA_Achr2G22860_001 Musa acuminata GSMUA_Achr2G22860_001 N 0.879
GSMUA_Achr6G09370_001 Musa acuminata GSMUA_Achr6G09370_001 N 0.879
GSMUA_Achr10G20230_001 Musa acuminata GSMUA_Achr10G20230_001 N 0.879
AMTR_s00024p00250370 Amborella trichopoda AMTR_s00024p00250370 N 0.879
GLYMA18G04420 Glycine max GLYMA18G04420 N 0.879
LPERR01G00690 Leersia perrieri LPERR01G00690 N 0.879
LPERR02G24230 Leersia perrieri LPERR02G24230 N 0.879
OBART01G00850 Oryza barthii OBART01G00850 N 0.879
OB02G36990 Oryza brachyantha OB02G36990 N 0.879
POPTR_0004s08770 Populus trichocarpa POPTR_0004s08770 N 0.879
MTR_5g079500 Medicago truncatula MTR_5g079500 N 0.879
GLYMA14G07590 Glycine max GLYMA14G07590 N 0.879
GLYMA11G33840 Glycine max GLYMA11G33840 N 0.879
Bo6g101000 Brassica oleracea Bo6g101000 N 0.879
Bo00835s050 Brassica oleracea Bo00835s050 N 0.879
BGIOSGA008903 Oryza indica BGIOSGA008903 N 0.879
BGIOSGA002533 Oryza indica BGIOSGA002533 N 0.879
Bra019708 Brassica rapa Bra019708 N 0.879
BRADI2G01000 Brachypodium distachyon BRADI2G01000 N 0.879
GLYMA02G41370 Glycine max GLYMA02G41370 N 0.879
RSL1 Arabidopsis lyrata fgenesh2_kg.7__3192__AT5G37800.1 N 0.879
F775_23458 Aegilops tauschii F775_23458 N 0.879
BHLH83 Arabidopsis thaliana AT1G66470 N 0.879
OBART02G29800 Oryza barthii OBART02G29800 N 0.879
OB01G10850 Oryza brachyantha OB01G10850 N 0.879
ORGLA01G0007400 Oryza glaberrima ORGLA01G0007400 N 0.879
OGLUM01G00830 Oryza glumaepatula OGLUM01G00830 N 0.879
OPUNC01G00700 Oryza punctata OPUNC01G00700 N 0.879
ONIVA02G32560 Oryza nivara ONIVA02G32560 N 0.879
ORGLA02G0253300 Oryza glaberrima ORGLA02G0253300 N 0.879
ORUFI01G00830 Oryza rufipogon ORUFI01G00830 N 0.879
PGSC0003DMG400030650 Solanum tuberosum PGSC0003DMG400030650 N 0.879
OS02G0710300 Oryza sativa OS02G0710300 N 0.879
OS01G0111500 Oryza sativa OS01G0111500 N 0.879
ORUFI02G31420 Oryza rufipogon ORUFI02G31420 N 0.879
ONIVA01G00780 Oryza nivara ONIVA01G00780 N 0.879
OPUNC02G27370 Oryza punctata OPUNC02G27370 N 0.879
OMERI02G28660 Oryza meridionalis OMERI02G28660 N 0.879
OLONG_010619 Oryza longistaminata OLONG_010619 N 0.879
OMERI01G00290 Oryza meridionalis OMERI01G00290 N 0.879
OGLUM02G30450 Oryza glumaepatula OGLUM02G30450 N 0.879
Si004720m.g Setaria italica Si004720m.g N 0.876
Pavir.Eb00817 Panicum virgatum Pavir.Eb00817 N 0.876
SELMODRAFT_426794 Selaginella moellendorffii SELMODRAFT_426794 N 0.859
SELMODRAFT_413232 Selaginella moellendorffii SELMODRAFT_413232 N 0.859
SELMODRAFT_414414 Selaginella moellendorffii SELMODRAFT_414414 N 0.856
SELMODRAFT_409967 Selaginella moellendorffii SELMODRAFT_409967 N 0.856
estExt_fgenesh1_pg.C_840011 Physcomitrella patens estExt_fgenesh1_pg.C_840011 N 0.853
estExt_fgenesh1_pg.C_1470079 Physcomitrella patens estExt_fgenesh1_pg.C_1470079 N 0.853
GSMUA_Achr3G01250_001 Musa acuminata GSMUA_Achr3G01250_001 N 0.849
BRADI1G42440 Brachypodium distachyon BRADI1G42440 N 0.847
F775_02947 Aegilops tauschii F775_02947 N 0.847
Traes_7BS_A0A8B25DF Triticum aestivum Traes_7BS_A0A8B25DF N 0.847
Traes_7DS_4053B6E88 Triticum aestivum Traes_7DS_4053B6E88 N 0.847
MLOC_37511 Hordeum vulgare MLOC_37511 N 0.847
TRIUR3_14379 Triticum urartu TRIUR3_14379 N 0.847
Pavir.Db01008 Panicum virgatum Pavir.Db01008 N 0.847