Carubv10019965m.g (Capsella rubella)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Carubv10019965m.g T049411_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10019965m bHLH 432 480
Carubv10020221m bHLH 282 330

Links

Other bHLH family TFs
Other Capsella rubella TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT4G28800 Arabidopsis thaliana AT4G28800 N 0.843
BHLH19 Arabidopsis thaliana AT2G22760 N 0.839
BHLH2 Arabidopsis thaliana AT1G63650 N 0.914
Bo4g141990 Brassica oleracea Bo4g141990 I 0.877
Bo9g029230 Brassica oleracea Bo9g029230 N 0.894
Bo9g086910 Brassica oleracea Bo9g086910 N 0.845
Bo9g086920 Brassica oleracea Bo9g086920 N 0.845
Bostr.19427s0043 Boechera stricta Bostr.19427s0043 N 0.839
Bostr.25463s0338 Boechera stricta Bostr.25463s0338 I 0.842
Bostr.29223s0199 Boechera stricta Bostr.29223s0199 N 0.914
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I 0.890
Bra025508 Brassica rapa Bra025508 I 0.877
Bra027653 Brassica rapa Bra027653 N 0.894
Bra027796 Brassica rapa Bra027796 N 0.894
Bra037887 Brassica rapa Bra037887 N 0.845
Cagra.0747s0001 Capsella grandiflora Cagra.0747s0001 N 0.839
Cagra.1664s0001 Capsella grandiflora Cagra.1664s0001 I 0.842
Cagra.2104s0007 Capsella grandiflora Cagra.2104s0007 N 0.914
Carubv10002462m.g Capsella rubella Carubv10002462m.g I 0.842
Carubv10004345m.g Capsella rubella Carubv10004345m.g I 0.890
Carubv10024768m.g Capsella rubella Carubv10024768m.g N 0.839
cassava8594.m1 Manihot esculenta cassava8594.m1 I 0.854
Ca_05750 Cicer arietinum Ca_05750 I 0.851
EGL3 Arabidopsis lyrata fgenesh2_kg.2__120__AT1G63650.2 N 0.914
e_gw1.31.270.1 Physcomitrella patens e_gw1.31.270.1 N 0.849
gene32494-v1.0-hybrid Fragaria vesca gene32494-v1.0-hybrid I 0.875
GL3 Arabidopsis thaliana AT5G41315 I 0.890
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I 0.890
GLYMA08G01810 Glycine max GLYMA08G01810 I 0.851
LjSGA_008146.1 Lotus japonicus LjSGA_008146.1 I 0.851
mgf005803m Mimulus guttatus mgf005803m I 0.853
MTR_8g098275 Medicago truncatula MTR_8g098275 I 0.851
PDK_20s1464821g001 Phoenix dactylifera PDK_20s1464821g001 I 0.838
Pm023805 Prunus mume Pm023805 I 0.875
POPTR_0003s12810 Populus trichocarpa POPTR_0003s12810 I 0.855
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I 0.875
Sb06g016380 Sorghum bicolor Sb06g016380 N 0.875
SELMODRAFT_73360 Selaginella moellendorffii SELMODRAFT_73360 N 0.849
SELMODRAFT_87033 Selaginella moellendorffii SELMODRAFT_87033 N 0.849
TCM_016261 Theobroma cacao TCM_016261 I 0.862
Thhalv10023356m.g Eutrema salsugineum Thhalv10023356m.g N 0.894
Thhalv10027709m.g Eutrema salsugineum Thhalv10027709m.g I 0.890
TT8 Arabidopsis lyrata fgenesh2_kg.6__2968__AT4G09820.1 I 0.842
TT8 Arabidopsis thaliana AT4G09820 I 0.842
VIT_02s0025g03450 Vitis vinifera VIT_02s0025g03450 N 0.849