Ciclev10001768m.g (Citrus clementina)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ciclev10001768m.g T049465_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10001768m bHLH 182 229

Links

Other bHLH family TFs
Other Citrus clementina TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PRUPE_ppa008172mg Prunus persica PRUPE_ppa008172mg N 0.894
Pm003525 Prunus mume Pm003525 N 0.894
Eucgr.H04337 Eucalyptus grandis Eucgr.H04337 N 0.894
gene16564-v1.0-hybrid Fragaria vesca gene16564-v1.0-hybrid N 0.894
MDP0000295593 Malus domestica MDP0000295593 N 0.894
Aquca_017_00590 Aquilegia coerulea Aquca_017_00590 N 0.894
Cucsa.289090 Cucumis sativus Cucsa.289090 N 0.894
GLYMA20G36770 Glycine max GLYMA20G36770 N 0.894
TCM_026346 Theobroma cacao TCM_026346 N 0.894
VIT_05s0020g04620 Vitis vinifera VIT_05s0020g04620 N 0.894
evm.TU.supercontig_117.94 Carica papaya evm.TU.supercontig_117.94 N 0.894
MTR_1g080890 Medicago truncatula MTR_1g080890 N 0.894
Cla011475 Citrullus lanatus Cla011475 N 0.894
GLYMA10G30430 Glycine max GLYMA10G30430 N 0.894
PK20184.1 Cannabis sativa PK20184.1 N 0.894
Ca_03755 Cicer arietinum Ca_03755 N 0.894
Gorai.007G277200 Gossypium raimondii Gorai.007G277200 N 0.894
VIT_14s0030g02230 Vitis vinifera VIT_14s0030g02230 N 0.894
MTR_1g070870 Medicago truncatula MTR_1g070870 N 0.882
Ciclev10021443m.g Citrus clementina Ciclev10021443m.g N 0.882
POPTR_0002s04620 Populus trichocarpa POPTR_0002s04620 N 0.882
Ca_07790 Cicer arietinum Ca_07790 N 0.882
Ca_12194 Cicer arietinum Ca_12194 N 0.882
Cla015040 Citrullus lanatus Cla015040 N 0.882
VIT_07s0141g00220 Vitis vinifera VIT_07s0141g00220 N 0.882
TCM_004217 Theobroma cacao TCM_004217 N 0.882
cassava36725.valid.m1 Manihot esculenta cassava36725.valid.m1 N 0.882
29883.m001988 Ricinus communis 29883.m001988 N 0.882
Cucsa.388780 Cucumis sativus Cucsa.388780 N 0.882
Eucgr.B01487 Eucalyptus grandis Eucgr.B01487 N 0.882
orange1.1g022649m.g Citrus sinensis orange1.1g022649m.g N 0.882
Gorai.001G242500 Gossypium raimondii Gorai.001G242500 N 0.882
GLYMA10G03690 Glycine max GLYMA10G03690 N 0.882
GLYMA02G16110 Glycine max GLYMA02G16110 N 0.882
GLYMA03G31510 Glycine max GLYMA03G31510 N 0.882
GLYMA19G34360 Glycine max GLYMA19G34360 N 0.882
chr1.CM0375.380.nc Lotus japonicus chr1.CM0375.380.nc N 0.882
PK25419.1 Cannabis sativa PK25419.1 N 0.882
Gorai.007G141800 Gossypium raimondii Gorai.007G141800 N 0.882
SapurV1A.0006s1290 Salix purpurea SapurV1A.0006s1290 N 0.882
chr5.LjT29J15.30.nc Lotus japonicus chr5.LjT29J15.30.nc N 0.881
MDP0000176749 Malus domestica MDP0000176749 N 0.871
Pm020229 Prunus mume Pm020229 N 0.871
Solyc09g083220.2 Solanum lycopersicum Solyc09g083220.2 N 0.871
PGSC0003DMG400013393 Solanum tuberosum PGSC0003DMG400013393 N 0.871
PRUPE_ppa009299mg Prunus persica PRUPE_ppa009299mg N 0.871
PGSC0003DMG400006089 Solanum tuberosum PGSC0003DMG400006089 N 0.871
gene08188-v1.0-hybrid Fragaria vesca gene08188-v1.0-hybrid N 0.871
Solyc03g005350.2 Solanum lycopersicum Solyc03g005350.2 N 0.868
29598.m000464 Ricinus communis 29598.m000464 N 0.864
cassava18573.valid.m1 Manihot esculenta cassava18573.valid.m1 N 0.864
Lus10015909.g Linum usitatissimum Lus10015909.g N 0.864
Lus10006587.g Linum usitatissimum Lus10006587.g N 0.864
SapurV1A.0860s0050 Salix purpurea SapurV1A.0860s0050 N 0.856
Solyc09g065820.2 Solanum lycopersicum Solyc09g065820.2 N 0.856
POPTR_0005s23930 Populus trichocarpa POPTR_0005s23930 N 0.856
Gorai.004G218900 Gossypium raimondii Gorai.004G218900 N 0.856
PGSC0003DMG400019334 Solanum tuberosum PGSC0003DMG400019334 N 0.856
Gorai.004G075200 Gossypium raimondii Gorai.004G075200 N 0.856
mgf001465m Mimulus guttatus mgf001465m N 0.856
OMERI06G24090 Oryza meridionalis OMERI06G24090 I 0.853
OPUNC09G11520 Oryza punctata OPUNC09G11520 I 0.853
BGIOSGA030928 Oryza indica BGIOSGA030928 N 0.853
Thhalv10028824m.g Eutrema salsugineum Thhalv10028824m.g N 0.852
Thhalv10008279m.g Eutrema salsugineum Thhalv10008279m.g N 0.852
Carubv10009831m.g Capsella rubella Carubv10009831m.g N 0.852
Cagra.0897s0074 Capsella grandiflora Cagra.0897s0074 N 0.852
Cagra.0635s0023 Capsella grandiflora Cagra.0635s0023 N 0.852
Bostr.2983s0202 Boechera stricta Bostr.2983s0202 N 0.852
Pavir.Ba03672 Panicum virgatum Pavir.Ba03672 I 0.852
Carubv10001523m.g Capsella rubella Carubv10001523m.g N 0.852
Pavir.J03221 Panicum virgatum Pavir.J03221 I 0.852
Pavir.J00283 Panicum virgatum Pavir.J00283 I 0.852
Pavir.J04249 Panicum virgatum Pavir.J04249 I 0.852
Si036929m.g Setaria italica Si036929m.g I 0.852
BGIOSGA025266 Oryza indica BGIOSGA025266 I 0.852
GRMZM2G162382 Zea mays GRMZM2G162382 I 0.852
GRMZM2G004356 Zea mays GRMZM2G004356 I 0.852
UNE12 Arabidopsis lyrata fgenesh2_kg.6__3435__AT4G02590.2 N 0.852
BGIOSGA013729 Oryza indica BGIOSGA013729 I 0.852
UNE12 Arabidopsis thaliana AT4G02590 N 0.852
Bo01031s030 Brassica oleracea Bo01031s030 N 0.852
LPERR03G31640 Leersia perrieri LPERR03G31640 I 0.852
AT1G03040 Arabidopsis thaliana AT1G03040 N 0.852
fgenesh2_kg.1__235__AT1G03040.1 Arabidopsis lyrata fgenesh2_kg.1__235__AT1G03040.1 N 0.852
BRADI1G55427 Brachypodium distachyon BRADI1G55427 I 0.852
Bo9g005930 Brassica oleracea Bo9g005930 N 0.852
Bo5g003580 Brassica oleracea Bo5g003580 N 0.852
Bo2g100750 Brassica oleracea Bo2g100750 N 0.852
Bra000872 Brassica rapa Bra000872 N 0.852
Bra018539 Brassica rapa Bra018539 N 0.852
BRADI1G05430 Brachypodium distachyon BRADI1G05430 I 0.852
Bra036256 Brassica rapa Bra036256 N 0.852
Bra033368 Brassica rapa Bra033368 N 0.852
OB07G13990 Oryza brachyantha OB07G13990 I 0.852
LPERR07G04600 Leersia perrieri LPERR07G04600 I 0.852
ONIVA07G04020 Oryza nivara ONIVA07G04020 I 0.852
ONIVA03G38760 Oryza nivara ONIVA03G38760 I 0.852
OS03G0797600 Oryza sativa OS03G0797600 I 0.852
OPUNC03G34510 Oryza punctata OPUNC03G34510 I 0.852
OPUNC07G05040 Oryza punctata OPUNC07G05040 I 0.852
ORUFI07G05060 Oryza rufipogon ORUFI07G05060 I 0.852
ORGLA07G0044500 Oryza glaberrima ORGLA07G0044500 I 0.852
ORGLA06G0244900 Oryza glaberrima ORGLA06G0244900 I 0.852
OMERI05G15760 Oryza meridionalis OMERI05G15760 I 0.852
Sb02g004570 Sorghum bicolor Sb02g004570 I 0.852
OGLUM03G37150 Oryza glumaepatula OGLUM03G37150 I 0.852
OBART07G05280 Oryza barthii OBART07G05280 I 0.852
OBART03G37400 Oryza barthii OBART03G37400 I 0.852
OGLUM07G04790 Oryza glumaepatula OGLUM07G04790 I 0.852
OLONG_014165 Oryza longistaminata OLONG_014165 I 0.852
OMERI03G34570 Oryza meridionalis OMERI03G34570 I 0.852
Si030704m.g Setaria italica Si030704m.g I 0.852
cassava22704.valid.m1 Manihot esculenta cassava22704.valid.m1 N 0.851
Lus10018761.g Linum usitatissimum Lus10018761.g N 0.847
Lus10002720.g Linum usitatissimum Lus10002720.g N 0.847
Lus10014726.g Linum usitatissimum Lus10014726.g N 0.847
evm.TU.supercontig_52.97 Carica papaya evm.TU.supercontig_52.97 N 0.847
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.842
GSMUA_Achr9G25560_001 Musa acuminata GSMUA_Achr9G25560_001 I 0.841
GSMUA_Achr5G03100_001 Musa acuminata GSMUA_Achr5G03100_001 I 0.841
GSMUA_Achr4G21070_001 Musa acuminata GSMUA_Achr4G21070_001 I 0.841