Ciclev10005872m.g (Citrus clementina)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ciclev10005872m.g T049479_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH104
M01706_2.00
Arabidopsis thaliana
GGCACGTGCC

GGCACGTGCC
PBM
Weirauch et al.(2014)
pTH7365
0.846 0.750
BHLH104
M06737_2.00
Arabidopsis thaliana
GVCACGTGBMDDBHNSDNBH

DVNHSNDVHHKVCACGTGBC
Dap-seq
OMalley et al.(2016)
bHLH104_col_b
0.846 0.750
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10005872m bHLH 60 111
Ciclev10005930m bHLH 46 97

Links

Other bHLH family TFs
Other Citrus clementina TFs

Invalid Input OrderBy

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action