Ciclev10016381m.g (Citrus clementina)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ciclev10016381m.g T049506_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10016381m bHLH 76 126
Ciclev10016508m bHLH 76 126
Ciclev10016893m bHLH 76 126

Links

Other bHLH family TFs
Other Citrus clementina TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
orange1.1g026646m.g Citrus sinensis orange1.1g026646m.g N 0.914
e_gw1.229.33.1 Physcomitrella patens e_gw1.229.33.1 I 0.894
estExt_gwp_gw1.C_2460032 Physcomitrella patens estExt_gwp_gw1.C_2460032 I 0.894
fgenesh1_pg.scaffold_13000185 Physcomitrella patens fgenesh1_pg.scaffold_13000185 I 0.894
VIT_12s0059g02650 Vitis vinifera VIT_12s0059g02650 I 0.888
SELMODRAFT_165311 Selaginella moellendorffii SELMODRAFT_165311 I 0.881
SELMODRAFT_165556 Selaginella moellendorffii SELMODRAFT_165556 I 0.881
Aquca_005_00425 Aquilegia coerulea Aquca_005_00425 I 0.875
fgenesh1_pg.scaffold_31000088 Physcomitrella patens fgenesh1_pg.scaffold_31000088 I 0.870
estExt_fgenesh1_pg.C_1360017 Physcomitrella patens estExt_fgenesh1_pg.C_1360017 I 0.870
AMTR_s00029p00112130 Amborella trichopoda AMTR_s00029p00112130 N 0.870
PRUPE_ppa010730mg Prunus persica PRUPE_ppa010730mg I 0.867
cassava37032.valid.m1 Manihot esculenta cassava37032.valid.m1 I 0.864
Cucsa.267130 Cucumis sativus Cucsa.267130 I 0.864
Cucsa.267170 Cucumis sativus Cucsa.267170 I 0.864
Ciclev10009354m.g Citrus clementina Ciclev10009354m.g I 0.864
MDP0000264803 Malus domestica MDP0000264803 I 0.864
orange1.1g026599m.g Citrus sinensis orange1.1g026599m.g I 0.864
SapurV1A.0712s0010 Salix purpurea SapurV1A.0712s0010 I 0.864
PK23013.1 Cannabis sativa PK23013.1 I 0.864
Lus10043076.g Linum usitatissimum Lus10043076.g I 0.864
Lus10011167.g Linum usitatissimum Lus10011167.g I 0.864
Eucgr.F03420 Eucalyptus grandis Eucgr.F03420 I 0.864
evm.TU.supercontig_97.78 Carica papaya evm.TU.supercontig_97.78 I 0.864
gene03303-v1.0-hybrid Fragaria vesca gene03303-v1.0-hybrid I 0.864
gene24654-v1.0-hybrid Fragaria vesca gene24654-v1.0-hybrid I 0.864
cassava37031.valid.m1 Manihot esculenta cassava37031.valid.m1 I 0.864
cassava24574.valid.m1 Manihot esculenta cassava24574.valid.m1 I 0.864
POPTR_0001s44230 Populus trichocarpa POPTR_0001s44230 I 0.864
GLYMA06G41620 Glycine max GLYMA06G41620 I 0.864
28166.m001054 Ricinus communis 28166.m001054 I 0.864
MTR_4g081370 Medicago truncatula MTR_4g081370 I 0.864
MTR_2g082640 Medicago truncatula MTR_2g082640 I 0.864
PRUPE_ppa009077mg Prunus persica PRUPE_ppa009077mg I 0.864
POPTR_0011s13580 Populus trichocarpa POPTR_0011s13580 I 0.864
Cla001735 Citrullus lanatus Cla001735 I 0.864
Pm029465 Prunus mume Pm029465 I 0.864
Ca_06956 Cicer arietinum Ca_06956 I 0.864
Ca_16355 Cicer arietinum Ca_16355 I 0.864
TCM_031118 Theobroma cacao TCM_031118 I 0.864
AMTR_s00098p00170370 Amborella trichopoda AMTR_s00098p00170370 N 0.859
Bo3g021940 Brassica oleracea Bo3g021940 I 0.857
TCM_030082 Theobroma cacao TCM_030082 I 0.855
GLYMA12G34300 Glycine max GLYMA12G34300 I 0.853
GLYMA13G36260 Glycine max GLYMA13G36260 I 0.853
chr3.CM0155.80.nd Lotus japonicus chr3.CM0155.80.nd N 0.852
GSMUA_Achr4G05310_001 Musa acuminata GSMUA_Achr4G05310_001 N 0.851
AMTR_s00070p00188780 Amborella trichopoda AMTR_s00070p00188780 I 0.846
Eucgr.G01757 Eucalyptus grandis Eucgr.G01757 I 0.846
POPTR_0009s13220 Populus trichocarpa POPTR_0009s13220 I 0.846
orange1.1g022288m.g Citrus sinensis orange1.1g022288m.g I 0.846
Ciclev10028783m.g Citrus clementina Ciclev10028783m.g I 0.846
MTR_4g075480 Medicago truncatula MTR_4g075480 I 0.846
PDK_20s1322801g004 Phoenix dactylifera PDK_20s1322801g004 N 0.843
VIT_00s0532g00050 Vitis vinifera VIT_00s0532g00050 N 0.843