CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10016461m.g
(
Citrus clementina
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Ciclev10016461m.g
T049507_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10016461m
bHLH
132
182
ATDSHSLAERVRRERINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ
Ciclev10016501m
bHLH
127
177
ATDSHSLAERVRRERINERLRCLQDLVPGCYKTMGMAVMLDVIINYVRSLQ
Links
Other
bHLH
family TFs
Other
Citrus clementina
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30066.m000713
Ricinus communis
30066.m000713
N
0.911
Bostr.12659s0424
Boechera stricta
Bostr.12659s0424
I
0.879
evm.TU.supercontig_65.44
Carica papaya
evm.TU.supercontig_65.44
I
0.879
orange1.1g042908m.g
Citrus sinensis
orange1.1g042908m.g
I
0.879
MDP0000725991
Malus domestica
MDP0000725991
I
0.879
PRUPE_ppa010885mg
Prunus persica
PRUPE_ppa010885mg
I
0.879
Pm029081
Prunus mume
Pm029081
I
0.879
Bra010993
Brassica rapa
Bra010993
I
0.879
Bo3g138670
Brassica oleracea
Bo3g138670
I
0.879
Thhalv10008699m.g
Eutrema salsugineum
Thhalv10008699m.g
I
0.876
VIT_01s0011g03720
Vitis vinifera
VIT_01s0011g03720
I
0.876
cassava14677.m1
Manihot esculenta
cassava14677.m1
I
0.876
Solyc04g007300.2
Solanum lycopersicum
Solyc04g007300.2
I
0.876
cassava46189.m1
Manihot esculenta
cassava46189.m1
I
0.876
BHLH75
Arabidopsis thaliana
AT1G25330
I
0.866
gene03713-v1.0-hybrid
Fragaria vesca
gene03713-v1.0-hybrid
N
0.859
Cla008090
Citrullus lanatus
Cla008090
N
0.859
mgf017044m
Mimulus guttatus
mgf017044m
I
0.858
mgf026269m
Mimulus guttatus
mgf026269m
N
0.856
VIT_07s0151g00450
Vitis vinifera
VIT_07s0151g00450
I
0.855
Carubv10010961m.g
Capsella rubella
Carubv10010961m.g
N
0.855
Solyc04g077480.2
Solanum lycopersicum
Solyc04g077480.2
I
0.855
GSMUA_Achr9G09770_001
Musa acuminata
GSMUA_Achr9G09770_001
I
0.855
PGSC0003DMG400004922
Solanum tuberosum
PGSC0003DMG400004922
I
0.855
Cagra.2231s0025
Capsella grandiflora
Cagra.2231s0025
N
0.855
GSMUA_Achr1G09570_001
Musa acuminata
GSMUA_Achr1G09570_001
I
0.855
GSMUA_AchrUn_randomG23560_001
Musa acuminata
GSMUA_AchrUn_randomG23560_001
I
0.855
Aquca_041_00009
Aquilegia coerulea
Aquca_041_00009
I
0.854
chr2.CM0903.30.nd
Lotus japonicus
chr2.CM0903.30.nd
I
0.851
AMTR_s00079p00137860
Amborella trichopoda
AMTR_s00079p00137860
I
0.846
TCM_019445
Theobroma cacao
TCM_019445
I
0.843
Gorai.008G055400
Gossypium raimondii
Gorai.008G055400
I
0.843
GSMUA_Achr10G19850_001
Musa acuminata
GSMUA_Achr10G19850_001
N
0.842
GSMUA_Achr2G09660_001
Musa acuminata
GSMUA_Achr2G09660_001
I
0.842
PDK_20s1896091g002
Phoenix dactylifera
PDK_20s1896091g002
N
0.839