Ciclev10032356m.g (Citrus clementina)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ciclev10032356m.g T049567_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK01630.1
M01118_2.00
Cannabis sativa
GCACGTGD

HCACGTGC
PBM
Lambert et al.(2019)
pTH11426
0.914 0.898
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10032356m bHLH 82 130

Links

Other bHLH family TFs
Other Citrus clementina TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK01630.1 Cannabis sativa PK01630.1 D 0.914
Bra000177 Brassica rapa Bra000177 I 0.845
29814.m000735 Ricinus communis 29814.m000735 I 0.894
cassava37862.valid.m1 Manihot esculenta cassava37862.valid.m1 I 0.914
Cucsa.136730 Cucumis sativus Cucsa.136730 I 0.914
Eucgr.J00190 Eucalyptus grandis Eucgr.J00190 I 0.914
evm.TU.supercontig_19.156 Carica papaya evm.TU.supercontig_19.156 I 0.914
gene21000-v1.0-hybrid Fragaria vesca gene21000-v1.0-hybrid I 0.884
Gorai.011G292100 Gossypium raimondii Gorai.011G292100 I 0.894
Gorai.012G078100 Gossypium raimondii Gorai.012G078100 I 0.873
Lus10007502.g Linum usitatissimum Lus10007502.g I 0.914
Lus10028978.g Linum usitatissimum Lus10028978.g I 0.914
orange1.1g023629m.g Citrus sinensis orange1.1g023629m.g I 0.914
SapurV1A.0061s0470 Salix purpurea SapurV1A.0061s0470 I 0.914
Pm018950 Prunus mume Pm018950 I 0.914
Cla006707 Citrullus lanatus Cla006707 I 0.914
Ca_13402 Cicer arietinum Ca_13402 I 0.894
fgenesh2_kg.108__1__AT2G40200.1 Arabidopsis lyrata fgenesh2_kg.108__1__AT2G40200.1 I 0.845
GLYMA02G42570 Glycine max GLYMA02G42570 I 0.873
GLYMA11G35480 Glycine max GLYMA11G35480 I 0.914
GLYMA18G02940 Glycine max GLYMA18G02940 I 0.914
MTR_3g070970 Medicago truncatula MTR_3g070970 I 0.894
PGSC0003DMG400015659 Solanum tuberosum PGSC0003DMG400015659 I 0.846
PGSC0003DMG400027725 Solanum tuberosum PGSC0003DMG400027725 I 0.873
POPTR_0008s07090 Populus trichocarpa POPTR_0008s07090 I 0.914
POPTR_0010s19400 Populus trichocarpa POPTR_0010s19400 I 0.912
PRUPE_ppa010134mg Prunus persica PRUPE_ppa010134mg I 0.914
Solyc03g095980.2 Solanum lycopersicum Solyc03g095980.2 I 0.873
TCM_042475 Theobroma cacao TCM_042475 I 0.914
VIT_13s0067g01350 Vitis vinifera VIT_13s0067g01350 I 0.914
chr2.CM0002.120.nc Lotus japonicus chr2.CM0002.120.nc I 0.903