Eucgr.K02496 (Eucalyptus grandis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Eucgr.K02496 T049705_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PIF4
M08046_2.00
Arabidopsis thaliana
CACGTGSV

BSCACGTG
ChIP-seq
Mathelier et al.(2014)
MA0561.1
0.858 0.740
PK05451.1
M01120_2.00
Cannabis sativa
YCACGTGM

KCACGTGR
PBM
Lambert et al.(2019)
pTH10100
0.849 0.740
PIF3
M00854_2.00
Arabidopsis thaliana
CACGTGSNN

NNSCACGTG
PBM
Franco-Zorrilla et al.(2014)
PIF3
0.849 0.720
PIF3
M00722_2.00
Arabidopsis thaliana
NCACRTN

NAYGTGN
PBM
Chang et al.(2013)
pTH8200
0.849 0.720
PIF3
M08045_2.00
Arabidopsis thaliana
HCACGTGGVH

DBCCACGTGD
ChIP-seq
Mathelier et al.(2014)
MA0560.1
0.849 0.720
PIF3
M09780_2.00
Arabidopsis thaliana
BDRRRVCACGTGRVSHCD

HGDSBYCACGTGBYYYHV
Transfac
Matys et al.(2006)
P$PIF3_01
0.849 0.720
PIF3
M09781_2.00
Arabidopsis thaliana
DDDVCCACGTGGVMVNB

VNBKBCCACGTGGBHHH
Transfac
Matys et al.(2006)
P$PIF3_02
0.849 0.720
UNE10
M01705_2.00
Arabidopsis thaliana
HCACGTGM

KCACGTGD
PBM
Weirauch et al.(2014)
pTH8112
0.846 0.780
PIF5
M08047_2.00
Arabidopsis thaliana
YCACRTGS

SCAYGTGR
ChIP-seq
Mathelier et al.(2014)
MA0562.1
0.846 0.720
PIF5
M09452_2.00
Arabidopsis thaliana
NNBCAYGTGV

BCACRTGVNN
Misc
Heinz et al.(2010)
Arabidopsis-PIF5ox_GSE35062
0.846 0.720
PIF1
M01703_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8733
0.845 0.700
PIF1
M08404_2.00
Arabidopsis thaliana
NCACGTGWSNYNHH

DDNRNSWCACGTGN
ChIP-chip
Mathelier et al.(2014)
MA0552.1
0.845 0.700
PIF1
M09783_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PIF1_01
0.845 0.700
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K02496.1 bHLH 245 294

Links

Other bHLH family TFs
Other Eucalyptus grandis TFs

333 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_039_00001 Aquilegia coerulea Aquca_039_00001 N 0.000
Bostr.10273s0360 Boechera stricta Bostr.10273s0360 N 0.000
Cagra.10840s0006 Capsella grandiflora Cagra.10840s0006 N 0.000
Carubv10022346m.g Capsella rubella Carubv10022346m.g N 0.000
cassava21091.m1 Manihot esculenta cassava21091.m1 N 0.000
cassava35563.valid.m1 Manihot esculenta cassava35563.valid.m1 N 0.000
Cucsa.185330 Cucumis sativus Cucsa.185330 N 0.000
Eucgr.K01194 Eucalyptus grandis Eucgr.K01194 N 0.000
gene24495-v1.0-hybrid Fragaria vesca gene24495-v1.0-hybrid N 0.000
GLYMA08G42321 Glycine max GLYMA08G42321 N 0.000
GLYMA18G12556 Glycine max GLYMA18G12556 N 0.000
Gorai.012G042700 Gossypium raimondii Gorai.012G042700 N 0.000
mgf000829m Mimulus guttatus mgf000829m N 0.000
PGSC0003DMG400021240 Solanum tuberosum PGSC0003DMG400021240 N 0.000
PK13949.1 Cannabis sativa PK13949.1 N 0.000
Pm014562 Prunus mume Pm014562 N 0.000
PRUPE_ppa002590mg Prunus persica PRUPE_ppa002590mg N 0.000
Solyc10g007810.2 Solanum lycopersicum Solyc10g007810.2 N 0.000
TCM_001836 Theobroma cacao TCM_001836 N 0.000
Thhalv10018229m.g Eutrema salsugineum Thhalv10018229m.g N 0.000
VIT_12s0142g00390 Vitis vinifera VIT_12s0142g00390 N 0.000