evm.TU.supercontig_141.19 (Carica papaya)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 evm.TU.supercontig_141.19 T049739_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BHLH14
M09785_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT4G00870_01
0.884 0.854
MYC2
M01699_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8083
0.870 0.896
PK18474.1
M01127_2.00
Cannabis sativa
NRCACGTGCN

NGCACGTGYN
PBM
Lambert et al.(2019)
pTH10273
0.870 0.896
PK18474.1
M01768_2.00
Cannabis sativa
NCACGWK

MWCGTGN
PBM
Weirauch et al.(2014)
pTH9589
0.870 0.896
MYC3
M01712_2.00
Arabidopsis thaliana
MWYGTGNNNN

NNNNCACRWK
PBM
Weirauch et al.(2014)
pTH8854
0.870 0.875
MYC4
M01707_2.00
Arabidopsis thaliana
NNCACGTGNN

NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8260
0.870 0.854
BHLH13
M01698_2.00
Arabidopsis thaliana
MCACGTGV

BCACGTGK
PBM
Weirauch et al.(2014)
pTH7565
0.857 0.854
OS01G0235700
M09894_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$BHLH66_01
0.846 0.812
BHLH28
M06742_2.00
Arabidopsis thaliana
NNNYGTACGGAH

DTCCGTACRNNN
Dap-seq
OMalley et al.(2016)
bHLH28_col_a
0.844 0.896
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_141.19 bHLH 313 360

Links

Other bHLH family TFs
Other Carica papaya TFs

369 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g07681 Acanthocheilonema viteae nAv.1.0.1.g07681 N 0.000
ANCCAN_14836 Ancylostoma caninum ANCCAN_14836 N 0.000
ANCDUO_02182 Ancylostoma duodenale ANCDUO_02182 N 0.000
ASU_13112 Ascaris suum ASU_13112 N 0.000
ASU_11556 Ascaris suum ASU_11556 N 0.000
Bm6729 Brugia malayi Bm6729 N 0.000
BTMF_0001529801 Brugia timori BTMF_0001529801 N 0.000
BXY_0012000 Bursaphelenchus xylophilus BXY_0012000 N 0.000
DICVIV_05112 Dictyocaulus viviparus DICVIV_05112 N 0.000
nDi.2.2.2.g00877 Dirofilaria immitis nDi.2.2.2.g00877 N 0.000
EEL_0000234701 Elaeophora elaphi EEL_0000234701 N 0.000
GPLIN_001229800 Globodera pallida GPLIN_001229800 N 0.000
GPUH_0001730001 Gongylonema pulchrum GPUH_0001730001 N 0.000
HCOI01213400 Haemonchus contortus HCOI01213400 N 0.000
HCOI01235400 Haemonchus contortus HCOI01235400 N 0.000
nLs.2.1.2.g03798 Litomosoides sigmodontis nLs.2.1.2.g03798 N 0.000
LOAG_04974 Loa loa LOAG_04974 N 0.000
genemark-nMf.1.1.scaf00510-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00510-processed-gene-0.4 N 0.000
NECAME_09201 Necator americanus NECAME_09201 N 0.000
OFLC_0000072301 Onchocerca flexuosa OFLC_0000072301 N 0.000
nOo.2.0.1.g04103 Onchocerca ochengi nOo.2.0.1.g04103 N 0.000
WBGene00241434 Onchocerca volvulus WBGene00241434 N 0.000
PTRK_0001652500 Parastrongyloides trichosuri PTRK_0001652500 N 0.000
scaffold336-EXSNAP2012.2 Pristionchus exspectatus scaffold336-EXSNAP2012.2 N 0.000
Ppa-sta-1 Pristionchus pacificus PPA16414 N 0.000
RSKR_0000819800 Rhabditophanes kr3021 RSKR_0000819800 N 0.000
L596_g22031 Steinernema carpocapsae L596_g22031 N 0.000
L889_g19163 Steinernema feltiae L889_g19163 N 0.000
L893_g3266 Steinernema glaseri L893_g3266 N 0.000
L898_g21673 Steinernema monticolum L898_g21673 N 0.000
L892_g25215 Steinernema scapterisci L892_g25215 N 0.000
SPAL_0001487500 Strongyloides papillosus SPAL_0001487500 N 0.000
SVE_0746000 Strongyloides venezuelensis SVE_0746000 N 0.000
TELCIR_06885 Teladorsagia circumcincta TELCIR_06885 N 0.000
WUBG_01454 Wuchereria bancrofti WUBG_01454 N 0.000