CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_53.118
(
Carica papaya
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
evm.TU.supercontig_53.118
T049778_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07858.1
M01123_2.00
Cannabis sativa
HCACGTGB
VCACGTGD
PBM
Lambert et al.(2019)
pTH11370
0.914
1.000
PK20225.1
M01128_2.00
Cannabis sativa
NCACGTGVN
NBCACGTGN
PBM
Lambert et al.(2019)
pTH11274
0.852
0.720
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_53.118
bHLH
162
211
ASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELK
Links
Other
bHLH
family TFs
Other
Carica papaya
TFs
128 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy