gene13480-v1.0-hybrid (Fragaria vesca)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 gene13480-v1.0-hybrid T049851_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna13480.1-v1.0-hybrid bHLH 60 105

Links

Other bHLH family TFs
Other Fragaria vesca TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_045_00179 Aquilegia coerulea Aquca_045_00179 N 0.894
AT5G01305 Arabidopsis thaliana AT5G01305 N 0.894
BGIOSGA004736 Oryza indica BGIOSGA004736 N 0.860
Bo2g001330 Brassica oleracea Bo2g001330 N 0.869
Bostr.6251s0101 Boechera stricta Bostr.6251s0101 N 0.894
Bra028895 Brassica rapa Bra028895 N 0.869
BRADI2G54030 Brachypodium distachyon BRADI2G54030 N 0.873
Cagra.4082s0011 Capsella grandiflora Cagra.4082s0011 N 0.894
cassava41569.m1 Manihot esculenta cassava41569.m1 N 0.894
Ca_09396 Cicer arietinum Ca_09396 N 0.894
Cla018363 Citrullus lanatus Cla018363 N 0.894
Cucsa.130030 Cucumis sativus Cucsa.130030 N 0.894
evm.TU.supercontig_120.27 Carica papaya evm.TU.supercontig_120.27 N 0.894
APTX Arabidopsis lyrata fgenesh2_kg.6__80__AT5G01310.1 N 0.914
GLYMA01G30660 Glycine max GLYMA01G30660 N 0.894
GLYMA03G06792 Glycine max GLYMA03G06792 N 0.894
GLYMA0732S00200 Glycine max GLYMA0732S00200 N 0.873
GLYMA07G18651 Glycine max GLYMA07G18651 N 0.849
Gorai.012G117300 Gossypium raimondii Gorai.012G117300 N 0.894
GRMZM2G397518 Zea mays GRMZM2G397518 N 0.873
GSMUA_Achr4G18820_001 Musa acuminata GSMUA_Achr4G18820_001 N 0.894
LjSGA_012662.1 Lotus japonicus LjSGA_012662.1 N 0.894
LPERR01G31030 Leersia perrieri LPERR01G31030 N 0.873
Lus10002213.g Linum usitatissimum Lus10002213.g N 0.846
Lus10003386.g Linum usitatissimum Lus10003386.g N 0.873
MDP0000178778 Malus domestica MDP0000178778 N 0.881
MDP0000436338 Malus domestica MDP0000436338 N 0.881
mg005373m Mimulus guttatus mg005373m N 0.890
MLOC_54157 Hordeum vulgare MLOC_54157 N 0.873
MTR_7g069590 Medicago truncatula MTR_7g069590 N 0.879
OBART01G36050 Oryza barthii OBART01G36050 N 0.873
OGLUM01G39950 Oryza glumaepatula OGLUM01G39950 N 0.873
OMERI01G33130 Oryza meridionalis OMERI01G33130 N 0.873
ONIVA01G41030 Oryza nivara ONIVA01G41030 N 0.873
OPUNC01G34850 Oryza punctata OPUNC01G34850 N 0.873
ORGLA01G0299600 Oryza glaberrima ORGLA01G0299600 N 0.873
ORGLA06G0253200 Oryza glaberrima ORGLA06G0253200 N 0.873
ORUFI01G39410 Oryza rufipogon ORUFI01G39410 N 0.873
LAX Oryza sativa OS01G0831000 N 0.873
Pavir.Ea03297 Panicum virgatum Pavir.Ea03297 N 0.873
Pavir.J06869 Panicum virgatum Pavir.J06869 N 0.873
Pm002868 Prunus mume Pm002868 N 0.894
POPTR_0006s10350 Populus trichocarpa POPTR_0006s10350 N 0.894
POPTR_0016s12830 Populus trichocarpa POPTR_0016s12830 N 0.894
PRUPE_ppa025490mg Prunus persica PRUPE_ppa025490mg N 0.894
SapurV1A.0001s0420 Salix purpurea SapurV1A.0001s0420 N 0.894
SapurV1A.0905s0090 Salix purpurea SapurV1A.0905s0090 N 0.894
Sb03g038820 Sorghum bicolor Sb03g038820 N 0.873
Si004520m.g Setaria italica Si004520m.g N 0.873
Solyc09g005070.1 Solanum lycopersicum Solyc09g005070.1 N 0.867
TCM_021641 Theobroma cacao TCM_021641 N 0.894
Thhalv10012562m.g Eutrema salsugineum Thhalv10012562m.g N 0.894
TRAES3BF030500010CFD_g Triticum aestivum TRAES3BF030500010CFD_g N 0.873
TRAES3BF030600030CFD_g Triticum aestivum TRAES3BF030600030CFD_g N 0.873
Traes_3B_D6EA106A51 Triticum aestivum Traes_3B_D6EA106A51 N 0.873
VIT_08s0058g00110 Vitis vinifera VIT_08s0058g00110 N 0.894