CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.007G023500
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.007G023500
T049998_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.007G023500.1
bHLH
421
470
LCKSHVLSERRRREKINERLMILKSLVPTNSKADKVSILDDTIEYLQDLE
Gorai.007G023500.2
bHLH
387
436
LCKSHVLSERRRREKINERLMILKSLVPTNSKADKVSILDDTIEYLQDLE
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.004G212200
Gossypium raimondii
Gorai.004G212200
N
0.863
Pm023805
Prunus mume
Pm023805
I
0.858
gene32494-v1.0-hybrid
Fragaria vesca
gene32494-v1.0-hybrid
I
0.858
PRUPE_ppa002762mg
Prunus persica
PRUPE_ppa002762mg
I
0.858
TCM_016261
Theobroma cacao
TCM_016261
I
0.858
Bra025508
Brassica rapa
Bra025508
I
0.856
Bo4g141990
Brassica oleracea
Bo4g141990
I
0.856
GL3
Arabidopsis thaliana
AT5G41315
I
0.856
Thhalv10027709m.g
Eutrema salsugineum
Thhalv10027709m.g
I
0.856
Carubv10004345m.g
Capsella rubella
Carubv10004345m.g
I
0.856
Bostr.7200s0145
Boechera stricta
Bostr.7200s0145
I
0.856
GL3
Arabidopsis lyrata
fgenesh2_kg.7__3280__AT5G41315.1
I
0.856
mgf005803m
Mimulus guttatus
mgf005803m
I
0.851
BHLH127
Arabidopsis thaliana
AT4G28815
N
0.845
POPTR_0003s12810
Populus trichocarpa
POPTR_0003s12810
I
0.838