CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.008G159000
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.008G159000
T050045_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.008G159000.1
bHLH
282
330
HSKNLITERNRRKKIKDGLFKLRALVPKISKMDITAILTDAMEYIGNLQ
Gorai.008G159000.2
bHLH
282
330
HSKNLITERNRRKKIKDGLFKLRALVPKISKMDITAILTDAMEYIGNLQ
Gorai.008G159000.3
bHLH
282
338
HSKNLITERNRRKKIKDGLFKLRALVPKISKEIYRRRKRNSGMSSRKPRKGTVERAM
Gorai.008G159000.4
bHLH
282
338
HSKNLITERNRRKKIKDGLFKLRALVPKISKEIYRRRKRNSGMSSRKPRKGTVERAM
Gorai.008G159000.5
bHLH
282
316
HSKNLITERNRRKKIKDGLFKLRALVPKISKVGSQ
Gorai.008G159000.6
bHLH
282
330
HSKNLITERNRRKKIKDGLFKLRALVPKISKMDITAILTDAMEYIGNLQ
Gorai.008G159000.7
bHLH
282
316
HSKNLITERNRRKKIKDGLFKLRALVPKISKVGSQ
Gorai.008G159000.8
bHLH
282
330
HSKNLITERNRRKKIKDGLFKLRALVPKISKMDITAILTDAMEYIGNLQ
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.009G337700
Gossypium raimondii
Gorai.009G337700
N
0.876
SELMODRAFT_77288
Selaginella moellendorffii
SELMODRAFT_77288
N
0.872
SCRM2
Arabidopsis thaliana
AT1G12860
I
0.844
Cucsa.160860
Cucumis sativus
Cucsa.160860
N
0.840
Cucsa.312190
Cucumis sativus
Cucsa.312190
N
0.840
chr2.CM0504.20.nd
Lotus japonicus
chr2.CM0504.20.nd
N
0.840
Cla023435
Citrullus lanatus
Cla023435
N
0.840
Ca_04981
Cicer arietinum
Ca_04981
N
0.840
GLYMA14G36370
Glycine max
GLYMA14G36370
N
0.840
GLYMA02G38240
Glycine max
GLYMA02G38240
N
0.840
MTR_3g111290
Medicago truncatula
MTR_3g111290
N
0.840
TCM_010375
Theobroma cacao
TCM_010375
N
0.840
TRIUR3_23651
Triticum urartu
TRIUR3_23651
N
0.840
Cla022518
Citrullus lanatus
Cla022518
N
0.840