Gorai.008G282300 (Gossypium raimondii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gorai.008G282300 T050055_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT4G25400
M09786_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT4G25400_01
0.854 0.615
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G282300.1 bHLH 60 112

Links

Other bHLH family TFs
Other Gossypium raimondii TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT4G25400 Arabidopsis thaliana AT4G25400 D 0.854
Gorai.006G196500 Gossypium raimondii Gorai.006G196500 I 0.886
evm.TU.supercontig_4.181 Carica papaya evm.TU.supercontig_4.181 I 0.850
Eucgr.F04119 Eucalyptus grandis Eucgr.F04119 I 0.851
Carubv10027166m.g Capsella rubella Carubv10027166m.g I 0.852
Cagra.0277s0021 Capsella grandiflora Cagra.0277s0021 I 0.852
Bostr.7867s0349 Boechera stricta Bostr.7867s0349 I 0.854
Bostr.15774s0324 Boechera stricta Bostr.15774s0324 I 0.852
cassava45968.m1 Manihot esculenta cassava45968.m1 I 0.865
cassava43207.valid.m1 Manihot esculenta cassava43207.valid.m1 I 0.852
Pm019419 Prunus mume Pm019419 I 0.841
TCM_016134 Theobroma cacao TCM_016134 I 0.852
TCM_016133 Theobroma cacao TCM_016133 I 0.852
Solyc06g035490.2 Solanum lycopersicum Solyc06g035490.2 I 0.841
POPTR_0012s14080 Populus trichocarpa POPTR_0012s14080 I 0.852
LjSGA_023375.1 Lotus japonicus LjSGA_023375.1 I 0.841
gene32346-v1.0-hybrid Fragaria vesca gene32346-v1.0-hybrid N 0.841