Gorai.011G034000 (Gossypium raimondii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gorai.011G034000 T050093_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK20225.1
M01128_2.00
Cannabis sativa
NCACGTGVN

NBCACGTGN
PBM
Lambert et al.(2019)
pTH11274
0.870 0.816
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G034000.1 bHLH 69 117

Links

Other bHLH family TFs
Other Gossypium raimondii TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.873
TCM_029711 Theobroma cacao TCM_029711 I 0.873
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.870
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.870
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.870
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.870
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.870
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.870
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.870
PK20225.1 Cannabis sativa PK20225.1 D 0.870
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.870
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.870
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.861
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.855
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.855
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.855
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.855
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.855
OS01G0218100 Oryza sativa OS01G0218100 I 0.855
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.855
OB01G17480 Oryza brachyantha OB01G17480 I 0.855
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.855
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.855
OPUNC05G04080 Oryza punctata OPUNC05G04080 N 0.850
Ca_06386 Cicer arietinum Ca_06386 I 0.850
OS05G0163900 Oryza sativa OS05G0163900 N 0.850
ORGLA05G0041400 Oryza glaberrima ORGLA05G0041400 N 0.850
ORUFI05G04670 Oryza rufipogon ORUFI05G04670 N 0.850
OLONG_015419 Oryza longistaminata OLONG_015419 N 0.850
OBART05G04450 Oryza barthii OBART05G04450 N 0.850
LPERR05G03980 Leersia perrieri LPERR05G03980 N 0.850
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.850
OGLUM05G04370 Oryza glumaepatula OGLUM05G04370 N 0.850
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.850
ONIVA05G04820 Oryza nivara ONIVA05G04820 N 0.850
OMERI05G04410 Oryza meridionalis OMERI05G04410 N 0.850
Cla019977 Citrullus lanatus Cla019977 I 0.849
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.849
MDP0000249969 Malus domestica MDP0000249969 I 0.849
Pavir.J32610 Panicum virgatum Pavir.J32610 N 0.848
Pavir.Ca01107 Panicum virgatum Pavir.Ca01107 I 0.848
Si012213m.g Setaria italica Si012213m.g N 0.848
Pavir.Ea00439 Panicum virgatum Pavir.Ea00439 I 0.848
ORUFI01G04050 Oryza rufipogon ORUFI01G04050 N 0.848
OBART01G03950 Oryza barthii OBART01G03950 N 0.848
Si002655m.g Setaria italica Si002655m.g I 0.848
OMERI01G03850 Oryza meridionalis OMERI01G03850 N 0.848
OB01G13800 Oryza brachyantha OB01G13800 N 0.848
LPERR01G03590 Leersia perrieri LPERR01G03590 I 0.848
BRADI2G03830 Brachypodium distachyon BRADI2G03830 I 0.848
GRMZM2G088443 Zea mays GRMZM2G088443 I 0.848
GRMZM2G369629 Zea mays GRMZM2G369629 N 0.848
ONIVA01G04390 Oryza nivara ONIVA01G04390 N 0.848
OGLUM01G04250 Oryza glumaepatula OGLUM01G04250 N 0.848
OPUNC01G03610 Oryza punctata OPUNC01G03610 N 0.848
Sb03g005250 Sorghum bicolor Sb03g005250 N 0.848
Sb09g004820 Sorghum bicolor Sb09g004820 N 0.848
BGIOSGA002833 Oryza indica BGIOSGA002833 N 0.848
ORGLA01G0034700 Oryza glaberrima ORGLA01G0034700 N 0.848
evm.TU.supercontig_21.7 Carica papaya evm.TU.supercontig_21.7 N 0.847
29900.m001610 Ricinus communis 29900.m001610 I 0.846
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.844
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.844
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.844
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.844
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.844
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.844
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.844
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.844