TF Information

Gorai.011G172500 *(Gossypium raimondii)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00010 (HLH)	IPR001092	Gorai.011G172500	T050102_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
BHLH34 M01704_2.00	Arabidopsis thaliana	VCACGYGH	DCRCGTGB	PBM Weirauch et al.(2014) pTH7212	0.878	0.808
BHLH34 M06734_2.00	Arabidopsis thaliana	NNNHNNDNNNNVCACGTGHCN	NGDCACGTGBNNNNHNNDNNN	Dap-seq OMalley et al.(2016) bHLH34_colamp_a	0.878	0.808
BHLH34 M06735_2.00	Arabidopsis thaliana	RWRNNNNNCACGTGBNNNNNNNN	NNNNNNNNVCACGTGNNNNNYWY	Dap-seq OMalley et al.(2016) bHLH34_col	0.878	0.808
BHLH104 M01706_2.00	Arabidopsis thaliana	GGCACGTGCC	GGCACGTGCC	PBM Weirauch et al.(2014) pTH7365	0.844	0.788
BHLH104 M06737_2.00	Arabidopsis thaliana	GVCACGTGBMDDBHNSDNBH	DVNHSNDVHHKVCACGTGBC	Dap-seq OMalley et al.(2016) bHLH104_col_b	0.844	0.788
For this family, TFs with SR scores > 0.838* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Gorai.011G172500.1	bHLH	59	110	RPGTKACREKLRREKLNERFLDLSSTLEPGRPARTDKSAILDDAIRVLTQLR
Gorai.011G172500.2	bHLH	58	109	RPGTKACREKLRREKLNERFLDLSSTLEPGRPARTDKSAILDDAIRVLTQLR
Gorai.011G172500.3	bHLH	56	107	RPGTKACREKLRREKLNERFLDLSSTLEPGRPARTDKSAILDDAIRVLTQLR

Links
Other bHLH family TFs
Other *Gossypium raimondii* TFs

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16 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action