Gorai.012G078100 (Gossypium raimondii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gorai.012G078100 T050107_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK01630.1
M01118_2.00 		Cannabis sativa
GCACGTGD
HCACGTGC		 PBM
Lambert et al.(2019)
pTH11426 		0.873 0.735
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.012G078100.1 bHLH 43 91

Links

Other bHLH family TFs
Other Gossypium raimondii TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA02G42570 Glycine max GLYMA02G42570 I 0.914
Solyc03g095980.2 Solanum lycopersicum Solyc03g095980.2 I 0.884
chr2.CM0002.120.nc Lotus japonicus chr2.CM0002.120.nc I 0.884
PGSC0003DMG400027725 Solanum tuberosum PGSC0003DMG400027725 I 0.884
Eucgr.J00190 Eucalyptus grandis Eucgr.J00190 I 0.873
Cucsa.136730 Cucumis sativus Cucsa.136730 I 0.873
evm.TU.supercontig_19.156 Carica papaya evm.TU.supercontig_19.156 I 0.873
Ciclev10032356m.g Citrus clementina Ciclev10032356m.g I 0.873
Lus10007502.g Linum usitatissimum Lus10007502.g I 0.873
SapurV1A.0061s0470 Salix purpurea SapurV1A.0061s0470 I 0.873
PK01630.1 Cannabis sativa PK01630.1 D 0.873
orange1.1g023629m.g Citrus sinensis orange1.1g023629m.g I 0.873
Lus10028978.g Linum usitatissimum Lus10028978.g I 0.873
cassava37862.valid.m1 Manihot esculenta cassava37862.valid.m1 I 0.873
gene21000-v1.0-hybrid Fragaria vesca gene21000-v1.0-hybrid I 0.873
Cla006707 Citrullus lanatus Cla006707 I 0.873
PRUPE_ppa010134mg Prunus persica PRUPE_ppa010134mg I 0.873
GLYMA18G02940 Glycine max GLYMA18G02940 I 0.873
TCM_042475 Theobroma cacao TCM_042475 I 0.873
VIT_13s0067g01350 Vitis vinifera VIT_13s0067g01350 I 0.873
Pm018950 Prunus mume Pm018950 I 0.873
GLYMA11G35480 Glycine max GLYMA11G35480 I 0.873
POPTR_0008s07090 Populus trichocarpa POPTR_0008s07090 I 0.873
POPTR_0010s19400 Populus trichocarpa POPTR_0010s19400 I 0.870
PGSC0003DMG400015659 Solanum tuberosum PGSC0003DMG400015659 I 0.858
Ca_13402 Cicer arietinum Ca_13402 I 0.852
GLYMA14G06330 Glycine max GLYMA14G06330 N 0.852
MTR_3g070970 Medicago truncatula MTR_3g070970 I 0.852
Gorai.011G292100 Gossypium raimondii Gorai.011G292100 I 0.852
29814.m000735 Ricinus communis 29814.m000735 I 0.852