Lus10009673.g (Linum usitatissimum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Lus10009673.g T050170_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gw1.270.82.1
M01758_2.00
Physcomitrella patens
NCACGTGH

DCACGTGN
PBM
Weirauch et al.(2014)
pTH8457
0.849 0.784
BHLH49
M01052_2.00
Arabidopsis thaliana
NNCACGTGCN

NGCACGTGNN
PBM
Sullivan et al.(2014)
pTH7309
0.849 0.765
PK06517.1
M01122_2.00
Cannabis sativa
NCACGTGC

GCACGTGN
PBM
Lambert et al.(2019)
pTH10104
0.849 0.765
BHLH74
M06720_2.00
Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW

WNNNNBCACGTGNNHNHSDHS
Dap-seq
OMalley et al.(2016)
bHLH74_col_a
0.849 0.745
BHLH74
M06721_2.00
Arabidopsis thaliana
CACGTGAY

RTCACGTG
Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a
0.849 0.745
BHLH77
M06736_2.00
Arabidopsis thaliana
NKCACGTGVHNWHNB

VNDWNDBCACGTGMN
Dap-seq
OMalley et al.(2016)
bHLH77_col_a
0.849 0.725
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10009673 bHLH 129 179

Links

Other bHLH family TFs
Other Linum usitatissimum TFs

341 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGOS_AEL295C Ashbya gossypii AGOS_AEL295C I 0.000
CaO19.5001 Candida albicans CaO19.5001 I 0.000
CaO19.12468 Candida albicans CaO19.12468 I 0.000
CD36_12620 Candida dubliniensis CD36_12620 I 0.000
CAGL0L09339g Candida glabrata CAGL0L09339g I 0.000
PGUG_05595 Candida guilliermondii PGUG_05595 I 0.000
CLUG_03246 Candida lusitaniae CLUG_03246 I 0.000
G210_3644 Candida maltosa G210_3644 I 0.000
CORT_0D01560 Candida orthopsilosis CORT_0D01560 I 0.000
CPAG_03050 Candida parapsilosis CPAG_03050 I 0.000
CANTEDRAFT_114577 Candida tenuis CANTEDRAFT_114577 I 0.000
CTRG_03632 Candida tropicalis CTRG_03632 I 0.000
CLUG_03246 Clavispora lusitaniae CLUG_03246 I 0.000
DEHA2D05500g Debaryomyces hansenii DEHA2D05500g I 0.000
Ecym_6116 Eremothecium cymbalariae Ecym_6116 I 0.000
KAFR_0B01950 Kazachstania africana KAFR_0B01950 I 0.000
KNAG_0D02340 Kazachstania naganishii KNAG_0D02340 I 0.000
KLLA0_A03047g Kluyveromyces lactis KLLA0_A03047g I 0.000
KLTH0G16984g Kluyveromyces thermotolerans KLTH0G16984g I 0.000
Kwal_1543 Kluyveromyces waltii Kwal_1543 I 0.000
PAS_chr3_0232 Komagataella pastoris PAS_chr3_0232 I 0.000
KUCA_T00002063001 Kuraishia capsulata KUCA_T00002063001 I 0.000
SAKL0B03344g Lachancea kluyveri SAKL0B03344g I 0.000
LALA0_S09e06546g Lachancea lanzarotensis LALA0_S09e06546g I 0.000
KLTH0G16984g Lachancea thermotolerans KLTH0G16984g I 0.000
LELG_03555 Lodderomyces elongisporus LELG_03555 I 0.000
PGUG_05595 Meyerozyma guilliermondii PGUG_05595 I 0.000
GNLVRS01_PISO0B06205g Millerozyma farinosa GNLVRS01_PISO0B06205g I 0.000
NCAS_0B05730 Naumovozyma castellii NCAS_0B05730 I 0.000
NDAI_0B03070 Naumovozyma dairenensis NDAI_0B03070 I 0.000
HPODL_01037 Ogataea parapolymorpha HPODL_01037 I 0.000
JL09_g5487 Pichia kudriavzevii JL09_g5487 I 0.000
JL09_g2035 Pichia kudriavzevii JL09_g2035 I 0.000
XP_002492448.1 Pichia pastoris XP_002492448.1 I 0.000
estExt_fgenesh1_pg.C_chr_1.20386 Pichia stipitis estExt_fgenesh1_pg.C_chr_1.20386 I 0.000
SU7_1098 Saccharomyces arboricola SU7_1098 I 0.000
SU7_3622 Saccharomyces arboricola SU7_3622 I 0.000
25568_YPR008W Saccharomyces bayanus 25568_YPR008W I 0.000
8357_YGL166W Saccharomyces bayanus 8357_YGL166W I 0.000
Scas_Contig710.11 Saccharomyces castellii Scas_Contig710.11 I 0.000
CUP2 Saccharomyces cerevisiae YGL166W D 0.000
HAA1 Saccharomyces cerevisiae YPR008W D 0.000
SKUD_166403 Saccharomyces kudriavzevii SKUD_166403 I 0.000
22312_YPR008W Saccharomyces mikatae 22312_YPR008W I 0.000
7226_YGL166W Saccharomyces mikatae 7226_YGL166W I 0.000
23384_YPR008W Saccharomyces paradoxus 23384_YPR008W I 0.000
AACERI_AaceriAEL295C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAEL295C I 0.000
PICST_66716 Scheffersomyces stipitis PICST_66716 I 0.000
TBLA_0C00170 Tetrapisispora blattae TBLA_0C00170 I 0.000
TPHA_0D00690 Tetrapisispora phaffii TPHA_0D00690 I 0.000
TDEL_0C01350 Torulaspora delbrueckii TDEL_0C01350 I 0.000
Kpol_541p30 Vanderwaltozyma polyspora Kpol_541p30 I 0.000
Kpol_467p5 Vanderwaltozyma polyspora Kpol_467p5 I 0.000
BN7_4399 Wickerhamomyces ciferrii BN7_4399 I 0.000
YALI0_B08206g Yarrowia lipolytica YALI0_B08206g I 0.000
ZBAI_01494 Zygosaccharomyces bailii ZBAI_01494 I 0.000
ZYRO0F04862g Zygosaccharomyces rouxii ZYRO0F04862g I 0.000