Lus10013917.g (Linum usitatissimum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Lus10013917.g T050189_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK20225.1
M01128_2.00
Cannabis sativa
NCACGTGVN

NBCACGTGN
PBM
Lambert et al.(2019)
pTH11274
0.882 0.857
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10013917 bHLH 85 133

Links

Other bHLH family TFs
Other Linum usitatissimum TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.912
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.884
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.882
TCM_029711 Theobroma cacao TCM_029711 I 0.882
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.882
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.882
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.882
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.882
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.882
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.882
PK20225.1 Cannabis sativa PK20225.1 D 0.882
GLYMA12G33751 Glycine max GLYMA12G33751 I 0.877
GLYMA13G36741 Glycine max GLYMA13G36741 I 0.877
Eucgr.D00509 Eucalyptus grandis Eucgr.D00509 I 0.870
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.870
Cla013743 Citrullus lanatus Cla013743 I 0.868
Cucsa.200860 Cucumis sativus Cucsa.200860 I 0.868
Ca_19863 Cicer arietinum Ca_19863 N 0.864
LjT46P06.140.nd Lotus japonicus LjT46P06.140.nd N 0.864
GLYMA06G43560 Glycine max GLYMA06G43560 N 0.864
GLYMA12G14400 Glycine max GLYMA12G14400 N 0.864
SapurV1A.0958s0180 Salix purpurea SapurV1A.0958s0180 N 0.861
POPTR_0013s12190 Populus trichocarpa POPTR_0013s12190 N 0.861
Ca_06386 Cicer arietinum Ca_06386 I 0.861
29646.m001078 Ricinus communis 29646.m001078 N 0.861
POPTR_0019s11870 Populus trichocarpa POPTR_0019s11870 N 0.861
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.861
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.861
MDP0000249969 Malus domestica MDP0000249969 I 0.860
29900.m001610 Ricinus communis 29900.m001610 I 0.858
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.855
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.855
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.855
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.855
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.855
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.855
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.855
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.855
VIT_12s0028g02350 Vitis vinifera VIT_12s0028g02350 N 0.852
MTR_4g079760 Medicago truncatula MTR_4g079760 N 0.852
mgf022146m Mimulus guttatus mgf022146m N 0.852
Ca_02482 Cicer arietinum Ca_02482 N 0.851
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.850
orange1.1g024326m.g Citrus sinensis orange1.1g024326m.g N 0.846
Ciclev10016261m.g Citrus clementina Ciclev10016261m.g N 0.846
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.844
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.844
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.844
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.844
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.844
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.844
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.844
OS01G0218100 Oryza sativa OS01G0218100 I 0.844
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.844
OB01G17480 Oryza brachyantha OB01G17480 I 0.844
Si002517m.g Setaria italica Si002517m.g I 0.843
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.842
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.842
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.842
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.842
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.842
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.842
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.842
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.842
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.842
OB03G21490 Oryza brachyantha OB03G21490 I 0.842
OS03G0260600 Oryza sativa OS03G0260600 I 0.842
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.842
OBART03G11320 Oryza barthii OBART03G11320 I 0.842
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.842
Si039730m.g Setaria italica Si039730m.g I 0.842
SapurV1A.2444s0040 Salix purpurea SapurV1A.2444s0040 N 0.841
SapurV1A.0596s0110 Salix purpurea SapurV1A.0596s0110 N 0.841
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.840
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.840
Pavir.J32610 Panicum virgatum Pavir.J32610 N 0.839
OBART01G03950 Oryza barthii OBART01G03950 N 0.839
ORGLA01G0034700 Oryza glaberrima ORGLA01G0034700 N 0.839
ORUFI01G04050 Oryza rufipogon ORUFI01G04050 N 0.839
OPUNC01G03610 Oryza punctata OPUNC01G03610 N 0.839
ONIVA01G04390 Oryza nivara ONIVA01G04390 N 0.839
OMERI01G03850 Oryza meridionalis OMERI01G03850 N 0.839
BGIOSGA002833 Oryza indica BGIOSGA002833 N 0.839
Sb03g005250 Sorghum bicolor Sb03g005250 N 0.839
OB01G13800 Oryza brachyantha OB01G13800 N 0.839
OGLUM01G04250 Oryza glumaepatula OGLUM01G04250 N 0.839
Si012213m.g Setaria italica Si012213m.g N 0.839
Sb09g004820 Sorghum bicolor Sb09g004820 N 0.839
GRMZM2G369629 Zea mays GRMZM2G369629 N 0.839