Lus10013917.g (Linum usitatissimum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Lus10013917.g T050189_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK20225.1
M01128_2.00
Cannabis sativa
NCACGTGVN

NBCACGTGN
PBM
Lambert et al.(2019)
pTH11274
0.882 0.857
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10013917 bHLH 85 133

Links

Other bHLH family TFs
Other Linum usitatissimum TFs

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK20225.1 Cannabis sativa PK20225.1 D 0.882
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.882
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.870
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.912
Sb03g001730 Sorghum bicolor Sb03g001730 I 0.855
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.842
MDP0000249969 Malus domestica MDP0000249969 I 0.860
OS03G0260600 Oryza sativa OS03G0260600 I 0.842
OS01G0218100 Oryza sativa OS01G0218100 I 0.844
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.842
ORUFI01G08040 Oryza rufipogon ORUFI01G08040 I 0.844
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.842
ORGLA01G0065100 Oryza glaberrima ORGLA01G0065100 I 0.844
Pavir.Ea00157 Panicum virgatum Pavir.Ea00157 I 0.855
OPUNC01G07130 Oryza punctata OPUNC01G07130 I 0.844
Si002517m.g Setaria italica Si002517m.g I 0.843
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.882
Si039730m.g Setaria italica Si039730m.g I 0.842
Cucsa.200860 Cucumis sativus Cucsa.200860 I 0.868
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.882
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.884
29900.m001610 Ricinus communis 29900.m001610 I 0.858
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.882
Cla013743 Citrullus lanatus Cla013743 I 0.868
Eucgr.D00509 Eucalyptus grandis Eucgr.D00509 I 0.870
Ca_06386 Cicer arietinum Ca_06386 I 0.861
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.850
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.882
gene29828-v1.0-hybrid Fragaria vesca gene29828-v1.0-hybrid I 0.855
TRAES3BF011300020CFD_g Triticum aestivum TRAES3BF011300020CFD_g I 0.855
TCM_029711 Theobroma cacao TCM_029711 I 0.882
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.882
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.842
ONIVA01G09540 Oryza nivara ONIVA01G09540 I 0.844
MLOC_64390 Hordeum vulgare MLOC_64390 I 0.855
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.842
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.844
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.842
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.840
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.842
GRMZM2G016039 Zea mays GRMZM2G016039 I 0.855
GLYMA13G36741 Glycine max GLYMA13G36741 I 0.877
GLYMA12G33751 Glycine max GLYMA12G33751 I 0.877
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.882
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.861
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.842
BGIOSGA003013 Oryza indica BGIOSGA003013 I 0.844
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.840
MTR_4g087920 Medicago truncatula MTR_4g087920 I 0.861
GRMZM2G166642 Zea mays GRMZM2G166642 I 0.855
Pavir.Eb00095 Panicum virgatum Pavir.Eb00095 I 0.855
OMERI01G07330 Oryza meridionalis OMERI01G07330 I 0.844
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.842
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.842
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.842
OGLUM01G08450 Oryza glumaepatula OGLUM01G08450 I 0.844
OB01G17480 Oryza brachyantha OB01G17480 I 0.844
OBART03G11320 Oryza barthii OBART03G11320 I 0.842
OB03G21490 Oryza brachyantha OB03G21490 I 0.842
Pavir.J32610 Panicum virgatum Pavir.J32610 N 0.839
SapurV1A.0596s0110 Salix purpurea SapurV1A.0596s0110 N 0.841
LjT46P06.140.nd Lotus japonicus LjT46P06.140.nd N 0.864
orange1.1g024326m.g Citrus sinensis orange1.1g024326m.g N 0.846
Ciclev10016261m.g Citrus clementina Ciclev10016261m.g N 0.846
SapurV1A.2444s0040 Salix purpurea SapurV1A.2444s0040 N 0.841
SapurV1A.0958s0180 Salix purpurea SapurV1A.0958s0180 N 0.861
mgf022146m Mimulus guttatus mgf022146m N 0.852
ONIVA01G04390 Oryza nivara ONIVA01G04390 N 0.839
OMERI01G03850 Oryza meridionalis OMERI01G03850 N 0.839
OGLUM01G04250 Oryza glumaepatula OGLUM01G04250 N 0.839
OBART01G03950 Oryza barthii OBART01G03950 N 0.839
OB01G13800 Oryza brachyantha OB01G13800 N 0.839
MTR_4g079760 Medicago truncatula MTR_4g079760 N 0.852
GRMZM2G369629 Zea mays GRMZM2G369629 N 0.839
BGIOSGA002833 Oryza indica BGIOSGA002833 N 0.839
GLYMA12G14400 Glycine max GLYMA12G14400 N 0.864
ORGLA01G0034700 Oryza glaberrima ORGLA01G0034700 N 0.839
ORUFI01G04050 Oryza rufipogon ORUFI01G04050 N 0.839
POPTR_0013s12190 Populus trichocarpa POPTR_0013s12190 N 0.861
29646.m001078 Ricinus communis 29646.m001078 N 0.861
Ca_19863 Cicer arietinum Ca_19863 N 0.864
Ca_02482 Cicer arietinum Ca_02482 N 0.851
OPUNC01G03610 Oryza punctata OPUNC01G03610 N 0.839
VIT_12s0028g02350 Vitis vinifera VIT_12s0028g02350 N 0.852
Si012213m.g Setaria italica Si012213m.g N 0.839
Sb09g004820 Sorghum bicolor Sb09g004820 N 0.839
Sb03g005250 Sorghum bicolor Sb03g005250 N 0.839
POPTR_0019s11870 Populus trichocarpa POPTR_0019s11870 N 0.861
GLYMA06G43560 Glycine max GLYMA06G43560 N 0.864