TF Information

Lus10034358.g *(Linum usitatissimum)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00010 (HLH)	IPR001092	Lus10034358.g	T050273_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
BIM2 M01701_2.00	Arabidopsis thaliana	NNCACGTGNN	NNCACGTGNN	PBM Weirauch et al.(2014) pTH8089	0.860	0.784
BIM2 M06727_2.00	Arabidopsis thaliana	CACGTGHBNNNNNNNNNNN	NNNNNNNNNNNVDCACGTG	Dap-seq OMalley et al.(2016) BIM2_colamp	0.860	0.784
BIM2 M06728_2.00	Arabidopsis thaliana	CACGTGMBNNNCVYV	BRBGNNNVKCACGTG	Dap-seq OMalley et al.(2016) BIM2_col_v3b	0.860	0.784
BIM1 M01710_2.00	Arabidopsis thaliana	NCRCGTGNNN	NNNCACGYGN	PBM Weirauch et al.(2014) pTH8114	0.840	0.804
BIM1 M06739_2.00	Arabidopsis thaliana	CACGTGAYNHNNNH	DNNNDNRTCACGTG	Dap-seq OMalley et al.(2016) BIM1_col_a	0.840	0.804
BIM1 M06740_2.00	Arabidopsis thaliana	NVKCACGTGMYHHNHNHNHNNN	NNNDNDNDNDDRKCACGTGMBN	Dap-seq OMalley et al.(2016) BIM1_colamp_a	0.840	0.804
BIM1 M09787_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$BIM1_01	0.840	0.804
For this family, TFs with SR scores > 0.838* will likely have a similar motif*